Detailed information of OS493_034355-T1 in Lophelia pertusa

Genomic Location: scaffold_288:319856...322652
NR annotation: KAJ7321736.1, Threonine synthase-like 2 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5M7T9Threonine synthase-like 2 OS=Rattus norvegicus OX=10116 GN=Thnsl2 PE=2 SV=1
Q5RFE6Threonine synthase-like 2 OS=Pongo abelii OX=9601 GN=THNSL2 PE=2 SV=1
Q86YJ6Threonine synthase-like 2 OS=Homo sapiens OX=9606 GN=THNSL2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004867 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_034355-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR051166
all species →		FamilyThreonine SynthaseInterproscan
IPR036052
all species →		Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42690
all species →		THREONINE SYNTHASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009071
all species →		Biological Processserine family amino acid catabolic processInterproscan
GO:0016311
all species →		Biological ProcessdephosphorylationInterproscan
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0046360
all species →		Biological Process2-oxobutyrate biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_034355-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_034355-T1 global co-expression network
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