Detailed information of OS493_034529-T1 in Lophelia pertusa

Genomic Location: scaffold_293:238496...239437
NR annotation: KAJ7351921.1, hypothetical protein OS493_034529 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P05412Transcription factor Jun OS=Homo sapiens OX=9606 GN=JUN PE=1 SV=2
P56432Transcription factor Jun OS=Sus scrofa OX=9823 GN=JUN PE=2 SV=1
P17535Transcription factor JunD OS=Homo sapiens OX=9606 GN=JUND PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001571 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03957
all species →		JunJun-like transcription factorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005643
all species →		DomainJun-like transcription factorInterproscan
IPR050946
all species →		FamilyAP-1 Transcription Factor bZIPInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11462
all species →		JUN TRANSCRIPTION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005667
all species →		Cellular Componenttranscription regulator complexInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008134
all species →		Molecular Functiontranscription factor bindingInterproscan
GO:0042127
all species →		Biological Processregulation of cell population proliferationInterproscan
GO:0051726
all species →		Biological Processregulation of cell cycleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_034529-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_034529-T1 global co-expression network
TOP