Detailed information of OS493_034607-T1 in Lophelia pertusa

Genomic Location: scaffold_295:369916...372681
NR annotation: KAJ7388969.1, LEM domain [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005492 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03020
all species →		LEMLEM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003887
all species →		DomainLEM domainInterproscan
IPR011015
all species →		Homologous_superfamilyLEM/LEM-like domain superfamilyInterproscan
IPR034998
all species →		FamilyAnkyrin repeat and LEM domain-containing protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46427
all species →		ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000712
all species →		Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0004519
all species →		Molecular Functionendonuclease activityInterproscan
GO:0004520
all species →		Molecular FunctionDNA endonuclease activityInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_034607-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_034607-T1 global co-expression network
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