Detailed information of OS493_034732-T1 in Lophelia pertusa

Genomic Location: scaffold_298:24757...36617
NR annotation: KAJ7370000.1, F-box DNA helicase 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F1ND48F-box DNA helicase 1 OS=Gallus gallus OX=9031 GN=FBH1 PE=2 SV=2
Q8K2I9F-box DNA helicase 1 OS=Mus musculus OX=10090 GN=Fbh1 PE=1 SV=1
Q8NFZ0F-box DNA helicase 1 OS=Homo sapiens OX=9606 GN=FBH1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003505 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_034732-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR000212
all species →		FamilyDNA helicase, UvrD/REP typeInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11070
all species →		UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0000725
all species →		Biological Processrecombinational repairInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003678
all species →		Molecular FunctionDNA helicase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0031297
all species →		Biological Processreplication fork processingInterproscan
GO:0043138
all species →		Molecular Function3'-5' DNA helicase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_034732-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_034732-T1 global co-expression network
TOP