Detailed information of OS493_034836-T1 in Lophelia pertusa

Genomic Location: scaffold_300:393743...394545
NR annotation: KAJ7321482.1, hypothetical protein OS493_034836 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9QZE7Translin-associated protein X OS=Mus musculus OX=10090 GN=Tsnax PE=1 SV=1
Q9JHB5Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1
Q99598Translin-associated protein X OS=Homo sapiens OX=9606 GN=TSNAX PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008028 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01997
all species →		TranslinTranslin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016068
all species →		Homologous_superfamilyTranslin, N-terminalInterproscan
IPR002848
all species →		FamilyTranslin familyInterproscan
IPR036081
all species →		Homologous_superfamilyTranslin superfamilyInterproscan
IPR016069
all species →		Homologous_superfamilyTranslin, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10741
all species →		TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN XInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0004521
all species →		Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_034836-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_034836-T1 global co-expression network
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