Detailed information of OS493_034863-T1 in Lophelia pertusa

Genomic Location: scaffold_301:283103...286408
NR annotation: KAJ7388935.1, Beclin-1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q91XJ1Beclin-1 OS=Rattus norvegicus OX=10116 GN=Becn1 PE=1 SV=1
O88597Beclin-1 OS=Mus musculus OX=10090 GN=Becn1 PE=1 SV=3
Q4A1L4Beclin-1 OS=Bos taurus OX=9913 GN=BECN1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005603 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15285
all species →		BH3Beclin-1 BH3 domain, Bcl-2-interactingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029318
all species →		DomainBeclin-1, BH3 domainInterproscan
IPR007243
all species →		FamilyAtg6/BeclinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12768
all species →		BECLIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000045
all species →		Biological Processautophagosome assemblyInterproscan
GO:0000407
all species →		Cellular Componentphagophore assembly siteInterproscan
GO:0006914
all species →		Biological ProcessautophagyInterproscan
GO:0006995
all species →		Biological Processcellular response to nitrogen starvationInterproscan
GO:0034271
all species →		Cellular Componentphosphatidylinositol 3-kinase complex, class III, type IInterproscan
GO:0034272
all species →		Cellular Componentphosphatidylinositol 3-kinase complex, class III, type IIInterproscan
GO:0045324
all species →		Biological Processlate endosome to vacuole transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_034863-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_034863-T1 global co-expression network
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