Detailed information of OS493_034893-T1 in Lophelia pertusa

Genomic Location: scaffold_303:36338...43806
NR annotation: KAJ7376372.1, hypothetical protein OS493_034893 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004431 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01535
all species →		PPRPPR repeatRepeatInterproscan
PF13041
all species →		PPR_2PPR repeat family RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002885
all species →		RepeatPentatricopeptide repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47938
all species →		RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_034893-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_034893-T1 global co-expression network
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