Detailed information of OS493_035095-T1 in Lophelia pertusa

Genomic Location: scaffold_309:76213...80253
NR annotation: KAJ7376352.1, hypothetical protein OS493_035095 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P97519Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1
Q29448Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus OX=9913 GN=HMGCL PE=2 SV=2
Q5R9E1Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Pongo abelii OX=9601 GN=HMGCL PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003337 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00682
all species →		HMGL-likeHMGL-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR043594
all species →		FamilyHMG-CoA lyaseInterproscan
IPR000891
all species →		DomainPyruvate carboxyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42738
all species →		HYDROXYMETHYLGLUTARYL-COA LYASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004419
all species →		Molecular Functionhydroxymethylglutaryl-CoA lyase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006552
all species →		Biological ProcessL-leucine catabolic processInterproscan
GO:0016833
all species →		Molecular Functionoxo-acid-lyase activityInterproscan
GO:0046951
all species →		Biological Processketone body biosynthetic processInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_035095-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_035095-T1 global co-expression network
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