Detailed information of OS493_035100-T1 in Lophelia pertusa

Genomic Location: scaffold_309:120668...122318
NR annotation: KAJ7376357.1, hypothetical protein OS493_035100 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
S7V0D3Vacuolar zinc transporter TgZnT OS=Toxoplasma gondii (strain ATCC 50853 / GT1) OX=507601 GN=TGGT1_251630 PE=3 SV=1
P0CE46Proton-coupled zinc antiporter SLC30A8 OS=Rattus norvegicus OX=10116 GN=Slc30a8 PE=1 SV=1
Q8BGG0Proton-coupled zinc antiporter SLC30A8 OS=Mus musculus OX=10090 GN=Slc30a8 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001455 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_035100-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR036837
all species →		Homologous_superfamilyCation efflux protein, cytoplasmic domain superfamilyInterproscan
IPR050681
all species →		FamilyCation Diffusion Facilitator/SLC30AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11562
all species →		CATION EFFLUX PROTEIN/ ZINC TRANSPORTERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005385
all species →		Molecular Functionzinc ion transmembrane transporter activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0010043
all species →		Biological Processresponse to zinc ionInterproscan
GO:0061088
all species →		Biological Processobsolete regulation of sequestering of zinc ionInterproscan
GO:0071577
all species →		Biological Processzinc ion transmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_035100-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_035100-T1 global co-expression network
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