Detailed information of OS493_035565-T1 in Lophelia pertusa

Genomic Location: scaffold_325:22667...52553
NR annotation: KAJ7388781.1, ubiquitin associated protein [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005638 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12478
all species →		UBAP2-LigUBAP2/protein lingererFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022166
all species →		FamilyUBAP2/protein lingererInterproscan
IPR051833
all species →		FamilyTranscription-coupled DNA damage response regulatorInterproscan
IPR009060
all species →		Homologous_superfamilyUBA-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16308
all species →		UBIQUITIN ASSOCIATED PROTEIN 2-LIKE/LINGERERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_035565-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_035565-T1 global co-expression network
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