Detailed information of OS493_035962-T1 in Lophelia pertusa

Genomic Location: scaffold_341:137980...149157
NR annotation: KAJ7351702.1, hypothetical protein OS493_035962 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8WPD0Alpha-N-acetylgalactosamine-specific lectin OS=Patiria pectinifera OX=7594 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000500 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13385
all species →		Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR050801
all species →		FamilyCalcium-Dependent Lectins in Immunity and DevelopmentInterproscan
IPR003609
all species →		DomainPAN/Apple domainInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR006558
all species →		DomainLamG-like jellyroll foldInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR018378
all species →		Conserved_siteC-type lectin, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22801
all species →		LITHOSTATHINEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_035962-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_035962-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_035962-T1 global co-expression network
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