Detailed information of OS493_035985-T1 in Lophelia pertusa

Genomic Location: scaffold_342:255596...259354
NR annotation: KAJ7319498.1, hypothetical protein OS493_035985 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08DM8Translin OS=Bos taurus OX=9913 GN=TSN PE=2 SV=1
Q62348Translin OS=Mus musculus OX=10090 GN=Tsn PE=1 SV=1
P97891Translin OS=Cricetulus griseus OX=10029 GN=TSN PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003811 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01997
all species →		TranslinTranslin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002848
all species →		FamilyTranslin familyInterproscan
IPR033956
all species →		FamilyTranslinInterproscan
IPR016068
all species →		Homologous_superfamilyTranslin, N-terminalInterproscan
IPR036081
all species →		Homologous_superfamilyTranslin superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10741
all species →		TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN XInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003697
all species →		Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0016070
all species →		Biological ProcessRNA metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_035985-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_035985-T1 global co-expression network
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