Detailed information of OS493_036587-T1 in Lophelia pertusa

Genomic Location: scaffold_373:79776...86159
NR annotation: KAJ7388621.1, Calcium-activated potassium channel subunit alpha-1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q03720Calcium-activated potassium channel slowpoke OS=Drosophila melanogaster OX=7227 GN=slo PE=1 SV=3
Q95V25Calcium-activated potassium channel slo-1 OS=Caenorhabditis elegans OX=6239 GN=slo-1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001657 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03493
all species →		BK_channel_aCalcium-activated BK potassium channel alpha subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047871
all species →		FamilyCalcium-activated potassium channel slowpoke-likeInterproscan
IPR003929
all species →		DomainCalcium-activated potassium channel BK, alpha subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10027
all species →		CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005267
all species →		Molecular Functionpotassium channel activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0045211
all species →		Cellular Componentpostsynaptic membraneInterproscan
GO:0060072
all species →		Molecular Functionlarge conductance calcium-activated potassium channel activityInterproscan
GO:0071805
all species →		Biological Processpotassium ion transmembrane transportInterproscan
GO:0006813
all species →		Biological Processpotassium ion transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_036587-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_036587-T1 global co-expression network
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