Detailed information of OS493_037978-T1 in Lophelia pertusa

Genomic Location: scaffold_488:848...1625
NR annotation: KAJ7381958.1, hypothetical protein OS493_037978 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P13439Uridine 5'-monophosphate synthase OS=Mus musculus OX=10090 GN=Umps PE=1 SV=3
P31754Uridine 5'-monophosphate synthase OS=Bos taurus OX=9913 GN=UMPS PE=2 SV=1
P11172Uridine 5'-monophosphate synthase OS=Homo sapiens OX=9606 GN=UMPS PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007946 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00215
all species →		OMPdecaseOrotidine 5'-phosphate decarboxylase / HUMPS familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014732
all species →		FamilyOrotidine 5'-phosphate decarboxylaseInterproscan
IPR029057
all species →		Homologous_superfamilyPhosphoribosyltransferase-likeInterproscan
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR018089
all species →		Active_siteOrotidine 5'-phosphate decarboxylase, active siteInterproscan
IPR001754
all species →		DomainOrotidine 5'-phosphate decarboxylase domainInterproscan
IPR011060
all species →		Homologous_superfamilyRibulose-phosphate binding barrelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19278
all species →		OROTATE PHOSPHORIBOSYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004590
all species →		Molecular Functionorotidine-5'-phosphate decarboxylase activityInterproscan
GO:0044205
all species →		Biological Process'de novo' UMP biosynthetic processInterproscan
GO:0006207
all species →		Biological Process'de novo' pyrimidine nucleobase biosynthetic processInterproscan
GO:0004588
all species →		Molecular Functionorotate phosphoribosyltransferase activityInterproscan
GO:0006222
all species →		Biological ProcessUMP biosynthetic processInterproscan
GO:0019856
all species →		Biological Processpyrimidine nucleobase biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_037978-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_037978-T1 global co-expression network
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