Detailed information of OS493_038024-T1 in Lophelia pertusa

Genomic Location: scaffold_493:104024...111414
NR annotation: KAJ7388378.1, hypothetical protein OS493_038024 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6ZHE5D-cysteine desulfhydrase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=DCD1 PE=1 SV=2
F4HYF3Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DCD PE=1 SV=1
Q9WY68Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0225 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001402 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_038024-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR036052
all species →
Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR027278
all species →
Family1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydraseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43780
all species →
1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019148
all species →
Molecular FunctionD-cysteine desulfhydrase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_038024-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_038024-T1 global co-expression network
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