Detailed information of OS493_038460-T1 in Lophelia pertusa

Genomic Location: scaffold_587:47843...56619
NR annotation: KAJ7350101.1, 28S ribosomal protein S29, mitochondrial [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9ER88Small ribosomal subunit protein mS29 OS=Mus musculus OX=10090 GN=Dap3 PE=1 SV=1
P51398Small ribosomal subunit protein mS29 OS=Homo sapiens OX=9606 GN=DAP3 PE=1 SV=1
P82922Small ribosomal subunit protein mS29 OS=Bos taurus OX=9913 GN=DAP3 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005252 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10236
all species →		DAP3Mitochondrial ribosomal death-associated protein 3FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008092
all species →		FamilySmall ribosomal subunit protein mS29, metazoan-typeInterproscan
IPR019368
all species →		FamilySmall ribosomal subunit protein mS29Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12810
all species →		MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005761
all species →		Cellular Componentmitochondrial ribosomeInterproscan
GO:0006915
all species →		Biological Processapoptotic processInterproscan
GO:0015935
all species →		Cellular Componentsmall ribosomal subunitInterproscan
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005763
all species →		Cellular Componentmitochondrial small ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_038460-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_038460-T1 global co-expression network
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