Detailed information of OS493_038507-T1 in Lophelia pertusa

Genomic Location: scaffold_605:395...565
NR annotation: KAJ7350092.1, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1, partial [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P52850Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 OS=Mus musculus OX=10090 GN=Ndst2 PE=1 SV=1
Q6GQK9Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 OS=Xenopus laevis OX=8355 GN=ndst1 PE=2 SV=1
Q5U4X8Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 OS=Xenopus tropicalis OX=8364 GN=ndst1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002036 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_038507-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR037359
all species →		FamilyHeparan sulfate sulfotransferaseInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10605
all species →		HEPARAN SULFATE SULFOTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0008146
all species →		Molecular Functionsulfotransferase activityInterproscan
GO:0015014
all species →		Biological Processheparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic processInterproscan
GO:0015016
all species →		Molecular Function[heparan sulfate]-glucosamine N-sulfotransferase activityInterproscan
GO:0019213
all species →		Molecular Functiondeacetylase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_038507-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_038507-T1 global co-expression network
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