Gene detail

Detailed information of OS493_038666-T1 in Lophelia pertusa

Genomic Location: scaffold_667:25136...26198
NR annotation: KAJ7388297.1, hypothetical protein OS493_038666 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A0C2SRU0	Decarboxylase iboD OS=Amanita muscaria (strain Koide BX008) OX=946122 GN=iboD PE=2 SV=1
A0A286LEZ8	L-tryptophan decarboxylase OS=Psilocybe cyanescens OX=93625 GN=psiD PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001281 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12588 all species →	PSDC	Phophatidylserine decarboxylase	Family	Interproscan
PF02666 all species →	PS_Dcarbxylase	Phosphatidylserine decarboxylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003817 all species →	Family	Phosphatidylserine decarboxylase-related	Interproscan
IPR022237 all species →	Domain	L-tryptophan decarboxylase PsiD-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10067 all species →	PHOSPHATIDYLSERINE DECARBOXYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004609 all species →	Molecular Function	phosphatidylserine decarboxylase activity	Interproscan
GO:0008654 all species →	Biological Process	phospholipid biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_038666-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_038666-T1 global co-expression network