Detailed information of OS493_038778-T1 in Lophelia pertusa

Genomic Location: scaffold_716:4010...16716
NR annotation: KAJ7381829.1, hypothetical protein OS493_038778 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9C102Glutamate synthase [NADH] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=glt1 PE=1 SV=1
Q03460Glutamate synthase [NADH], amyloplastic OS=Medicago sativa OX=3879 PE=1 SV=1
Q0JKD0Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0681900 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002031 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01645
all species →		Glu_synthaseConserved region in glutamate synthaseDomainInterproscan
PF01493
all species →		GXGXGGXGXG motifFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR036485
all species →		Homologous_superfamilyGlutamate synthase, alpha subunit, C-terminal domain superfamilyInterproscan
IPR051394
all species →		FamilyGlutamate SynthaseInterproscan
IPR002932
all species →		DomainGlutamate synthase domainInterproscan
IPR002489
all species →		DomainGlutamate synthase, alpha subunit, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43100
all species →		GLUTAMATE SYNTHASE [NADPH] SMALL CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0006537
all species →		Biological Processglutamate biosynthetic processInterproscan
GO:0015930
all species →		Molecular Functionglutamate synthase activityInterproscan
GO:0016638
all species →		Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donorsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_038778-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_038778-T1 global co-expression network
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