Detailed information of OS493_039151-T1 in Lophelia pertusa

Genomic Location: scaffold_955:2798...9962
NR annotation: KAJ7388217.1, Autophagy protein [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96BY7Autophagy-related protein 2 homolog B OS=Homo sapiens OX=9606 GN=ATG2B PE=1 SV=5
Q80XK6Autophagy-related protein 2 homolog B OS=Mus musculus OX=10090 GN=Atg2b PE=1 SV=3
Q6P4T0Autophagy-related protein 2 homolog A OS=Mus musculus OX=10090 GN=Atg2a PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0086969 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_039151-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR026849
all species →		FamilyAutophagy-related protein 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13190
all species →		AUTOPHAGY-RELATED 2, ISOFORM AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000045
all species →		Biological Processautophagosome assemblyInterproscan
GO:0000407
all species →		Cellular Componentphagophore assembly siteInterproscan
GO:0000422
all species →		Biological Processautophagy of mitochondrionInterproscan
GO:0006914
all species →		Biological ProcessautophagyInterproscan
GO:0032266
all species →		Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:0034727
all species →		Biological Processpiecemeal microautophagy of the nucleusInterproscan
GO:0044805
all species →		Biological Processobsolete late nucleophagyInterproscan
GO:0061709
all species →		Biological ProcessreticulophagyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_039151-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_039151-T1 global co-expression network
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