Detailed information of OS493_039197-T1 in Lophelia pertusa

Genomic Location: scaffold_983:15664...17477
NR annotation: KAJ7348763.1, btaf1 RNA polymerase II, partial [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O14981TATA-binding protein-associated factor 172 OS=Homo sapiens OX=9606 GN=BTAF1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002291 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12054
all species →		DUF3535Domain of unknown function (DUF3535)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR044972
all species →		FamilyTATA-binding protein-associated factor Mot1Interproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR022707
all species →		DomainMot1, central domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36498
all species →		TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan
GO:0017025
all species →		Molecular FunctionTBP-class protein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_039197-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_039197-T1 global co-expression network
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