Detailed information of OS493_039484-T1 in Lophelia pertusa

Genomic Location: scaffold_1193:13793...16998
NR annotation: KAJ7348217.1, calpain 7, partial [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9R1S8Calpain-7 OS=Mus musculus OX=10090 GN=Capn7 PE=2 SV=1
Q9Y6W3Calpain-7 OS=Homo sapiens OX=9606 GN=CAPN7 PE=1 SV=1
A0FKG7Calpain-7 OS=Sus scrofa OX=9823 GN=CAPN7 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003919 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00648
all species →		Peptidase_C2Calpain family cysteine proteaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001300
all species →		DomainPeptidase C2, calpain, catalytic domainInterproscan
IPR022684
all species →		FamilyPeptidase C2, calpain familyInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR051297
all species →		FamilyPalB/RIM13 Calpain-like ProteaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46143
all species →		CALPAIN-7Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004198
all species →		Molecular Functioncalcium-dependent cysteine-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0004197
all species →		Molecular Functioncysteine-type endopeptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_039484-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_039484-T1 global co-expression network
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