Detailed information of OS493_039760-T1 in Lophelia pertusa

Genomic Location: scaffold_1422:5468...13947
NR annotation: KAJ7312350.1, Integrator complex subunit 5, partial [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004082 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14838
all species →		INTS5_CIntegrator complex subunit 5 C-terminusFamilyInterproscan
PF14837
all species →		INTS5_NIntegrator complex subunit 5 N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029444
all species →		DomainIntegrator complex subunit 5, C-terminalInterproscan
IPR040316
all species →		FamilyIntegrator complex subunit 5Interproscan
IPR029445
all species →		DomainIntegrator complex subunit 5, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31697
all species →		INTEGRATOR COMPLEX SUBUNIT 5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0032039
all species →		Cellular Componentintegrator complexInterproscan
GO:0034472
all species →		Biological ProcesssnRNA 3'-end processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_039760-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_039760-T1 global co-expression network
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