Detailed information of OS493_039957-T1 in Lophelia pertusa

Genomic Location: scaffold_1593:3899...8075
NR annotation: KAJ7375632.1, Tetratricopeptide repeat protein 8, partial [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8VD72Tetratricopeptide repeat protein 8 OS=Mus musculus OX=10090 GN=Ttc8 PE=1 SV=1
Q8TAM2Tetratricopeptide repeat protein 8 OS=Homo sapiens OX=9606 GN=TTC8 PE=1 SV=2
Q23049Tetratricopeptide repeat protein 8 OS=Caenorhabditis elegans OX=6239 GN=bbs-8 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005424 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_039957-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR028796
all species →		FamilyTetratricopeptide repeat protein 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44177
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 8Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0034464
all species →		Cellular ComponentBBSomeInterproscan
GO:0036064
all species →		Cellular Componentciliary basal bodyInterproscan
GO:0097730
all species →		Cellular Componentnon-motile ciliumInterproscan
GO:1905515
all species →		Biological Processnon-motile cilium assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_039957-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_039957-T1 global co-expression network
TOP