Detailed information of OS493_040023-T1 in Lophelia pertusa

Genomic Location: scaffold_1656:7787...10269
NR annotation: KAJ7388066.1, hypothetical protein OS493_040023, partial [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q60445Coatomer subunit epsilon OS=Cricetulus griseus OX=10029 GN=COPE PE=2 SV=2
O14579Coatomer subunit epsilon OS=Homo sapiens OX=9606 GN=COPE PE=1 SV=3
O89079Coatomer subunit epsilon OS=Mus musculus OX=10090 GN=Cope PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005637 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04733
all species →		Coatomer_ECoatomer epsilon subunitRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006822
all species →		FamilyCoatomer, epsilon subunitInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10805
all species →		COATOMER SUBUNIT EPSILONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan
GO:0006888
all species →		Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006890
all species →		Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0006891
all species →		Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0030126
all species →		Cellular ComponentCOPI vesicle coatInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_040023-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_040023-T1 global co-expression network
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