Gene detail

Detailed information of OS493_040254-T1 in Lophelia pertusa

Genomic Location: scaffold_1946:6895...10073
NR annotation: KAJ7381589.1, hypothetical protein OS493_040254 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P12276	Fatty acid synthase OS=Gallus gallus OX=9031 GN=FASN PE=1 SV=5
Q71SP7	Fatty acid synthase OS=Bos taurus OX=9913 GN=FASN PE=1 SV=1
P19096	Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003022 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08659 all species →	KR	KR domain	Family	Interproscan
PF00550 all species →	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan
PF00975 all species →	Thioesterase	Thioesterase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009081 all species →	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR013968 all species →	Domain	Polyketide synthase, ketoreductase domain	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR036736 all species →	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR020806 all species →	Domain	Polyketide synthase, phosphopantetheine-binding domain	Interproscan
IPR050091 all species →	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR001031 all species →	Domain	Thioesterase	Interproscan
IPR006162 all species →	PTM	Phosphopantetheine attachment site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775 all species →	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0031177 all species →	Molecular Function	phosphopantetheine binding	Interproscan
GO:0004312 all species →	Molecular Function	fatty acid synthase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006633 all species →	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_040254-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_040254-T1 global co-expression network