Detailed information of OS493_040255-T1 in Lophelia pertusa

Genomic Location: scaffold_1949:1744...5497
NR annotation: KAJ7346449.1, hypothetical protein OS493_040255 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JMD0Clustered mitochondria protein homolog OS=Danio rerio OX=7955 GN=cluh PE=2 SV=1
B0W2S0Clustered mitochondria protein homolog OS=Culex quinquefasciatus OX=7176 GN=CPIJ001445 PE=3 SV=1
Q17N71Clustered mitochondria protein homolog OS=Aedes aegypti OX=7159 GN=AAEL000794 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0049743 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_040255-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR027523
all species →
FamilyCLU domain containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12601
all species →
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0006996
all species →
Biological Processorganelle organizationInterproscan
GO:0048312
all species →
Biological Processintracellular distribution of mitochondriaInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11145mrnC; mini-ribonuclease IIIEC:3.1.26.-
Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_040255-T1 global co-expression network
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