Detailed information of OS493_040327-T1 in Lophelia pertusa

Genomic Location: scaffold_2059:7753...9662
NR annotation: KAJ7388022.1, Ankyrin repeat and SAM domain-containing protein 6, partial [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q68DC2Ankyrin repeat and SAM domain-containing protein 6 OS=Homo sapiens OX=9606 GN=ANKS6 PE=1 SV=2
Q6GQX6Ankyrin repeat and SAM domain-containing protein 6 OS=Mus musculus OX=10090 GN=Anks6 PE=1 SV=2
P0C0T2Ankyrin repeat and SAM domain-containing protein 6 OS=Rattus norvegicus OX=10116 GN=Anks6 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003218 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536
all species →		SAM_1SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013761
all species →		Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR001660
all species →		DomainSterile alpha motif domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10627
all species →		SCP160Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_040327-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_040327-T1 global co-expression network
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