Detailed information of OS493_040407-T1 in Lophelia pertusa

Genomic Location: scaffold_2198:2777...8548
NR annotation: KAJ7381570.1, hypothetical protein OS493_040407 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3SZ71Mitochondrial-processing peptidase subunit beta OS=Bos taurus OX=9913 GN=PMPCB PE=2 SV=1
O75439Mitochondrial-processing peptidase subunit beta OS=Homo sapiens OX=9606 GN=PMPCB PE=1 SV=2
Q5REK3Mitochondrial-processing peptidase subunit beta OS=Pongo abelii OX=9601 GN=PMPCB PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005767 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05193
all species →		Peptidase_M16_CPeptidase M16 inactive domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050361
all species →		FamilyMitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexInterproscan
IPR007863
all species →		DomainPeptidase M16, C-terminalInterproscan
IPR011249
all species →		Homologous_superfamilyMetalloenzyme, LuxS/M16 peptidase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11851
all species →		METALLOPROTEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006627
all species →		Biological Processprotein processing involved in protein targeting to mitochondrionInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_040407-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_040407-T1 global co-expression network
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