Gene detail

Detailed information of OS493_040425-T1 in Lophelia pertusa

Genomic Location: scaffold_2238:1118...5650
NR annotation: KAJ7307843.1, hypothetical protein OS493_040425, partial [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9XTA2	Prolyl endopeptidase OS=Bos taurus OX=9913 GN=PREP PE=2 SV=1
Q9QUR6	Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=1 SV=1
P23687	Prolyl endopeptidase OS=Sus scrofa OX=9823 GN=PREP PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002666 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02897 all species →	Peptidase_S9_N	Prolyl oligopeptidase, N-terminal beta-propeller domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051167 all species →	Family	Prolyl oligopeptidase and macrocyclase	Interproscan
IPR023302 all species →	Domain	Peptidase S9A, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42881 all species →	PROLYL ENDOPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0070012 all species →	Molecular Function	oligopeptidase activity	Interproscan
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20350	TMED3; p24 family protein gamma-4	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_040425-T1 global co-expression network