Detailed information of OS493_040450-T1 in Lophelia pertusa

Genomic Location: scaffold_2286:2229...5339
NR annotation: KAJ7307839.1, metalloendopeptidase, partial [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
E9QBI7Metalloendopeptidase OMA1, mitochondrial OS=Danio rerio OX=7955 GN=oma1 PE=3 SV=1
Q3SZN3Metalloendopeptidase OMA1, mitochondrial OS=Bos taurus OX=9913 GN=OMA1 PE=2 SV=2
D3ZS74Metalloendopeptidase OMA1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oma1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002755 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01435
all species →		Peptidase_M48Peptidase family M48DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051156
all species →		FamilyMitochondrial and Outer Membrane MetalloproteaseInterproscan
IPR001915
all species →		DomainPeptidase M48Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22726
all species →		METALLOENDOPEPTIDASE OMA1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005743
all species →		Cellular Componentmitochondrial inner membraneInterproscan
GO:0006515
all species →		Biological Processprotein quality control for misfolded or incompletely synthesized proteinsInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0034982
all species →		Biological Processmitochondrial protein processingInterproscan
GO:0051603
all species →		Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_040450-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_040450-T1 global co-expression network
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