Detailed information of OS493_040552-T1 in Lophelia pertusa

Genomic Location: scaffold_2498:3837...3991
NR annotation: KAJ7381545.1, hypothetical protein OS493_040552, partial [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P207153-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Xenopus laevis OX=8355 GN=hmgcr PE=2 SV=1
P549603-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Blattella germanica OX=6973 PE=2 SV=1
P040353-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Homo sapiens OX=9606 GN=HMGCR PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005293 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00368
all species →		HMG-CoA_redHydroxymethylglutaryl-coenzyme A reductaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023074
all species →		Homologous_superfamilyHydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamilyInterproscan
IPR023076
all species →		Conserved_siteHydroxymethylglutaryl-CoA reductase, class I/II, conserved siteInterproscan
IPR002202
all species →		FamilyHydroxymethylglutaryl-CoA reductase, class I/IIInterproscan
IPR009029
all species →		Homologous_superfamilyHydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10572
all species →		3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004420
all species →		Molecular Functionhydroxymethylglutaryl-CoA reductase (NADPH) activityInterproscan
GO:0005778
all species →		Cellular Componentperoxisomal membraneInterproscan
GO:0005789
all species →		Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0008299
all species →		Biological Processisoprenoid biosynthetic processInterproscan
GO:0015936
all species →		Biological Processcoenzyme A metabolic processInterproscan
GO:0016126
all species →		Biological Processsterol biosynthetic processInterproscan
GO:0016616
all species →		Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_040552-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_040552-T1 global co-expression network
TOP