Detailed information of RMX38408.1 in Pocillopora damicornis

Genomic Location: SczhEnG_4033:277792...282233
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O61231Large ribosomal subunit protein uL16 OS=Drosophila melanogaster OX=7227 GN=RpL10 PE=1 SV=1
O96647Large ribosomal subunit protein uL16 OS=Bombyx mandarina OX=7092 GN=RpL10 PE=2 SV=1
Q08200Large ribosomal subunit protein uL16 (Fragment) OS=Gallus gallus OX=9031 GN=RPL10 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007663 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00252
all species →		Ribosomal_L16Ribosomal protein L16p/L10eDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047873
all species →		FamilyLarge ribosomal subunit protein uL16Interproscan
IPR016180
all species →		DomainLarge ribosomal subunit protein uL16 domainInterproscan
IPR036920
all species →		Homologous_superfamilyLarge ribosomal subunit protein uL16 superfamilyInterproscan
IPR001197
all species →		FamilyLarge ribosomal subunit protein uL16, eukaryotes/archaeaInterproscan
IPR018255
all species →		Conserved_siteLarge ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11726
all species →		60S RIBOSOMAL PROTEIN L10Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0000027
all species →		Biological Processribosomal large subunit assemblyInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for RMX38408.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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