Gene detail

Detailed information of RMX38580.1 in Pocillopora damicornis

Genomic Location: SczhEnG_3994:415911...425260
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

pdam_00008395

ATGGAAGATATAGCCAGGAAGAAATTTACATACGATCATGTATCTTCGTACAAGGCTCGCGGAAAAGTCAGAGCTTCAGATCGTAATTTTCGAGCTCAGCGTGCAAGTGAAAAACGTCACCTCTCCAGGATGGATGCAATCTCCAAACGAAGGAGAATGCCTCTATCTCCACTGGCTGATGAAAACGTGGTTGACAAGTGTACGAAAGCGGGAGAAAACGTTGATGAGCTTCAAGATGAAACTTCAAAACCACAGCTTAGCAGAAGAGAGCAGCTAATCAAGTGGCAAGAGGAGCGAAAACAAAAGAAAGCTTCTGAATCACAGAAAAGGAAATCTTTTGTTGTGCGTCACGTCAAACACCAAGAAGATGCTACTCTTTATTCCATCAGTTCTGGGAAGAAAGTGAACAGAGGGGTTACTCAACCAGTTAAACCTGACTCCAAACCTGCTGCAAACAAATCCGACAAACAGGTCCCTAGGGCATCAGCTAGGATTGCCAAAAAGGAATCAAGTAAAGCAGCTAATTACAAAAGTAATATGAAGGCTAAATTTAGCTCCGACAAGACTGGCAGGGTCACAAGGCAAAGTGTTCAAATGAAATCATCTTCAACTGGCAAAAATGTTGCTGTCTCTCAGTCCAGCAAGAAAGGAGAGCCAAAAAACCAAGTGAAAACAAGATCTCAAGCCAAGAAACTTCAAGAAAAATCAACGAGAAGTGTTAAGGATACCCAACAAGTTCCACTTGAAGAAACAACTCAGGAGTTTACAAAAATTGATTTACCAGCTCTGGAGAACATAAAGAATACTGTTTCATTTGGTAGAGGGAGCTCAGAAGGTGTGGATAGGAATGCAAAAAAGCCAGGACCAGATTTGGGGCCACCATCTCTTGCTCCCAAAGATTTTCAGTTCACTGCTCCAAGTGGCATCAACACCTTCACATACTTATCAAAAACATTCACATTTCAGCCACTTAGCCCAAAGAGTGCTGCGGAATTTATATTTCCAACATCAGCGTCTTCTTTTCTTAGTCCCAACAAGGAGAAATCTACTGAAGAAATGCAGACAGAGAGCACAGCTTGGGAAGACCCTGTGGCACTTTGTCATATGAATAGTACACTAGATGAAAAAGAGAACACTGAACAACAGATGGCTGATTATGAAATGGAGAAATGTGAGGGATCTGGAAGTCAAGAAGGTACAGGTAGTAATGTAGATGAGAAAAAGGACACAGCATCTTGTCCAACAGATGCCAAAATTTCATCCAGCCAAGGACAGTCTTCATTAGCTGAAGAAACAGATGATGGCAGCGATCTTGACACACAACATGATGCAGCATACTTTAGGAATCTTGTAGCAAAGGAGACTGACAGGTTGAATGAAATCTGTGCAAAATGGGAGAGGATTAATGCTGATGAACAAAGCCTCAGTGAGGAAGTGACTGGGCAAATAAGGACAGTAATTGGCCAAGCCCAGTTGTTAATTGATCAGAGGTTCCGTCAGTTTTCAGGCCTCATAGATCTGAGTGAGGACAAAAATGCCGAAAAGCAAGCCACTGCCTCTGACCTTCAAGGTTTCTGGGAAATGATTTATTTCCAGGTTGAAGATGTGAATGCTAAGTTTGATGCACTGGAGAAGTTAAAGGAAAACAACTGGAAAGAGGAAGAAAAGAAGACAAAGAAATCCTTGAAGAAGACAAAAGCAAAGAAACCATCCGAAAATGCTGACGCTAAACCTAACAACAAAGCGGCTGCTGCAAGAAACAGAATTCAAGAAATGAGATTGGCAATGAAGGCAAAGATGGCTGAAGAAAAAGAGAAGTTGAGAGCCGAAAAAAGACATCATCAGGAAGAGGCTTTCGTTACTATTCTAACACCTGTGAAAAAGTGTAAGAAAAACGATGGAAGCGAGGAGGTAGTATTGACACCAGTGCGCCGATCCATTCGTAAGACGCCACAGTTACGTGTTATGGCTGGTAACAGCACACCCGTGATAGTGACCACACCTATGATTATCAGTGAAGACAGTCCAGGGCTAAGACTTACTCCAGACAATGGCATTCAAGCCAGCGAAATGGTTGTTACAGGAAGTAGAATGAAACTTGAAGAACCAAACCAGGAAGACGTGTGTGAAATGGAAAGCAAACAAGAAGAAGGTAAAATTCATTGCGAACTCGAACAAGTGAAACCAGAAGTTTTGAAATCTGCTCGTAAGACTACAGAGGACAAACCTCGAAAGACTCCGGGAAAAGTCACCTTTCAATCGCCTGGTCAAGAAAGCACGCCTGCATATGCAGCTCACGAAGGAGGTAGTACTCCGACAGAGACCGCTGTTGAAGATAATCCAGACCCAATCGAGAGCAAAGCCAAGAGGTCAACTCCGCGCTGTTTTTCGGCGCGTAAATGCCGCAGTCGCTCAGGAACACCCTATTACCAGCAGAGGCCTCGACGAAGAGTTTCTACTGTCGACGAGAATGTTGCACACGGGACAGAAAGTGCAGAATGTAGCTCATCAGAATCTGATGCCGAAGCCAAACCTAAAGAGCAGTGCCCTGGGTCGGGATTGAGAAGGTCATTGCGAAGGACGCCCTCTAAATACCGAGATTCGGCGCCTTTAGAGGCTGAAGCTGTTGGAAAGACTCCGGAACAAATTTCCGTGAAACTGTTCCAAGCAACGGAGGAGCCTTCTACATGTGACTTGCCCAAAAATGGTCAAGAACCAGATGCATTCTGTAGATATCTGTGCCCTTCCTCGTCGGATGAAGAAGACTGCGAGAAGAAACCTGTGGACTCAGTGCCTGTGGATGAGATCGTGTTTGCTAACAAGGACCCCAAATTGGAAGGCACCGCTGTCGGCGCAGATGTCAACATCACTCCGCCAGACGAACCCGGCCCCTTTCTCAAGCCTTCAATCACTAAAAGTGAACCCAAGACAGGCAGGACACCCATACACATCCTCAGGTATCTCTCAGACATGGACACACCATCTCCAAACTCCCGCCAAATTACTCCCATGCCGAAGACCACGATATATGTATCTCCCTCTAAGAACAGCAAGACTCCTGCACTTGGAGACAGCTTAGGGATGATGTCACCGGAACACGTGGTGCGACGATTTCCTGCCAATAATGATGGTTCGCCGCTCGTTACGCTGGCTGCAGGGGCTGGAAAAGAAGGCTCACGCGCCGTGACGCCATGCTGTCAGTTGGCTGTGTTTAGTCTTGACTCTCCAGGTAAGAGTGAGAAGAGACGAGACTCCGTCTTCTTTGCTTCCGTGTCGACCTCTGTGGCCGGGGCTGTGGATAACCTGATGTCCTTCTCGCCAGTTGTAGAGTCAAATGAATCAGATTAA

Transcript

rna-pdam_00008395

ATGGAAGATATAGCCAGGAAGAAATTTACATACGATCATGTATCTTCGTACAAGGCTCGCGGAAAAGTCAGAGCTTCAGATCGTAATTTTCGAGCTCAGCGTGCAAGTGAAAAACGTCACCTCTCCAGGATGGATGCAATCTCCAAACGAAGGAGAATGCCTCTATCTCCACTGGCTGATGAAAACGTGGTTGACAAGTGTACGAAAGCGGGAGAAAACGtTGATGAGCTTCAAGATGAAACTTCAAAACCACAGCTTAGCAGAAGAGAGCAGCTAATCAAGTGGCAAGAGGagcgaaaacaaaagaaagcttCTGAATCacagaaaaggaaatcttttGTTGTGCGTCACGTCAAACACCAAGAAGATGCTACTCTTTATTCCATCAGTTCTGGGAAGAAAGTGAACAGAGGGGTTACTCAACCAGTTAAACCTGACTCCAAACCTGCTGCAAACAAATCCGACAAACAGGTCCCTAGGGCATCAGCTAGGATTGCCAAAAAGGAATCAAGTAAAGCAGCTAATTACAAAAGTAATATGAAGGCTAAATTTAGCTCCGACAAGACTGGCAGGGTCACAAGGCAAAGTGTTCAAATGAAATCATCTTCAACTGGCAAAAATGTTGCTGTCTCTCAGTCCAGCAAGAAAGGAGAGCCAAAAAACCAAGTGAAAACAAGATCTCAAGCCAAgaaacttcaagaaaaatcaACGAGAAGTGTTAAGGATACCCAACAAGTTCCACTTGAAGAAACAACTCAGgagtttacaaaaattgatttaccAGCTCTGGAGAACATAAAGAATACTGTTTCATTTGGTAGAGGGAGCTCAGAAGGTGTGGATAGGAATGCAAAAAAGCCAGGACCAGATTTGGGGCCACCATCTCTTGCTCCCAAAGATTTTCAGTTCACTGCTCCAAGTGGCATCAACACCTTCACATACTTATCAAAAACATTCACATTTCAGCCACTTAGCCCAAAGAGTGCTGCGGAATTTATATTTCCAACATCAGCGTCTTCTTTTCTTAGTCCCAACAAGGAGAAATCTACTGAAGAAATGCAGACAGAGAGCACAGCTTGGGAAGACCCTGTGGCACTTTGTCATATGAATAGTACACTAGATGAAAAAGAGAACACTGAACAACAGATGGCTGATTATGAAATGGAGAAATGTGAGGGATCTGGAAGTCAAGAAGGTACAGGTAGTAATGTAGATGAGAAAAAGGACACAGCATCTTGTCCAACAGATGCCAAAATTTCATCCAGCCAAGGACAGTCTTCATTAGCTGAAGAAACAGATGATGGCAGCGATCTTGACACACAACATGATGCAGCATACTTTAGGAATCTTGTAGCAAAGGAGACTGACAGGTTGAATGAAATCTGTGCAAAATGGGAGAGGATTAATGCTGATGAACAAAGCCTCAGTGAGGAAGtgACTGGGCAAATAAGGACAGTAATTGGCCAAGCCCAGTTGTTAATTGATCAGAGGTTCCGTCAGTTTTCAGGCCTCATAGATCTGAGTGAGGACAAAAATGCCGAAAAGCAAGCCACTGCCTCTGACCTTCAAGGTTTCTGGgaaatgatttatttccaGGTTGAAGATGTGAATGCTAAGTTTGATGCACTGGAgaagttaaaggaaaacaactggaaagaggaagaaaagaagacaaagaaatcCTTGAAGAAGACAAAAGCAAAGAAACCATCCGAAAATGCTGACGCTAAACCTAACAACAAAGCGGCTGCTGCAAGAAACAGAATTCAAGAAATGAGATTGGCAATGAAGGCAAAGATggctgaagaaaaagagaagttgAGAGCCGAAAAAAGACATCATCAGGAAGAGGCTTTCGTTACTATTCTAACACCTGTGAAAAAGTGTAAGAAAAACGATGGAAGCGAGGAGGTAGTATTGACACCAGTGCGCCGATCCATTCGTAAGACGCCACAGTTACGTGTTATGGCTGGTAACAGCACACCCGTGATAGTGACCACACCTATGATTATCAGTGAAGACAGTCCAGGGCTAAGACTTACTCCAGACAATGGCATTCAAGCCAGCGAAATGGTTGTTACAGGAAGTAGAATGAAACTTGAAGAACCAAACCAGGAAGACGTGTGTGAAATGGAAAGCAAACAAGAAGAAGGTAAAATTCATTGCGAACTCGAACAAGTGAAACCAGAAGTTTTGAAATCTGCTCGTAAGACTACAGAGGACAAACCTCGAAAGACTCCGGGAAAAGTCACCTTTCAATCGCCTGGTCAAGAAAGCACGCCTGCATATGCAGCTCACGAAGGAGGTAGTACTCCGACAGAGACCGCTGTTGAAGATAATCCAGACCCAATCGAGAGCAAAGCCAAGAGGTCAACTCCGCGCTGTTTTTCGGCGCGTAAATGCCGCAGTCGCTCAGGAACACCCTATTACCAGCAGAGGCCTCGACGAAGAGTTTCTACTGTCGACGAGAATGTTGCACACGGGACAGAAAGTGCAGAATGTAGCTCATCAGAATCTGATGCCGAAGCCAAACCTAAAGAGCAGTGCCCTGGGTCGGGATTGAGAAGGTCATTGCGAAGGACGCCCTCTAAATACCGAGATTCGGCGCCTTTAGAGGCTGAAGCTGTTGGAAAGACTCCGGAACAAATTTCCGTGAAACTGTTCCAAGCAACGGAGGAGCCTTCTACATGTGACTTGCCCAAAAATGGTCAAGAACCAGATGCATTCTGTAGATATCTGTGCCCTTCCTCGTCGGATGAAGAAGACTGCGAGAAGAAACCTGTGGACTCAGTGCCTGTGGATGAGATCGTGTTTGCTAACAAGGACCCCAAATTGGAAGGCACCGCTGTCGGCGCAGATGTCAACATCACTCCGCCAGACGAACCCGGCCCCTTTCTCAAGCCTTCAATCACTAAAAGTGAACCCAAGACAGGCAGGACACCCATACACATCCTCAGGTATCTCTCAGACATGGACACACCATCTCCAAACTCCCGCCAAATTACTCCCATGCCGAAGACCACGATATATGTATCTCCCTCTAAGAACAGCAAGACTCCTGCACTTGGAGACAGCTTAGGGATGATGTCACCGGAACACGTGGTGCGACGATTTCCTGCCAATAATGATGGTTCGCCGCTCGTTACGCTGGCTGCAGGGGCTGGAAAAGAAGGCTCACGCGCCGTGACGCCATGCTGTCAGTTGGCTGTGTTTAGTCTTGACTCTCCAGGTAAGAGTGAGAAGAGACGAGACTCCGTCTTCTTTGCTTCCGTGTCGACCTCTGTGGCCGGGGCTGTGGATAACCTGATGTCCTTCTCGCCAGTTGTAGAGTCAAATGAATCAGATTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K4R9	Disks large-associated protein 5 OS=Mus musculus OX=10090 GN=Dlgap5 PE=1 SV=2
Q15398	Disks large-associated protein 5 OS=Homo sapiens OX=9606 GN=DLGAP5 PE=1 SV=2
Q9P1A6	Disks large-associated protein 2 OS=Homo sapiens OX=9606 GN=DLGAP2 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03359 all species →	GKAP	Guanylate-kinase-associated protein (GKAP) protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005026 all species →	Family	SAPAP family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12353 all species →	DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0023052 all species →	Biological Process	signaling	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007052 all species →	Biological Process	mitotic spindle organization	Interproscan
GO:0007059 all species →	Biological Process	chromosome segregation	Interproscan
GO:0007346 all species →	Biological Process	regulation of mitotic cell cycle	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0031616 all species →	Cellular Component	spindle pole centrosome	Interproscan
GO:0051382 all species →	Biological Process	kinetochore assembly	Interproscan
GO:0051642 all species →	Biological Process	centrosome localization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16804	DLGAP5, DLG7; disks large-associated protein 5	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.