Gene detail

Detailed information of RMX40200.1 in Pocillopora damicornis

Genomic Location: SczhEnG_3692:217505...223321
NR annotation: no NCBI-NR hit recorded
Species abbreviation PDAMI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B6J2S1	L-threonine 3-dehydrogenase OS=Coxiella burnetii (strain CbuG_Q212) OX=434923 GN=tdh PE=3 SV=1
A9KET6	L-threonine 3-dehydrogenase OS=Coxiella burnetii (strain Dugway 5J108-111) OX=434922 GN=tdh PE=3 SV=1
A9NA21	L-threonine 3-dehydrogenase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) OX=360115 GN=tdh PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00107 all species →	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF08240 all species →	ADH_N	Alcohol dehydrogenase GroES-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR013149 all species →	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR011032 all species →	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR050129 all species →	Family	Zinc-containing alcohol dehydrogenase	Interproscan
IPR013154 all species →	Domain	Alcohol dehydrogenase-like, N-terminal	Interproscan
IPR002328 all species →	Conserved_site	Alcohol dehydrogenase, zinc-type, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43401 all species →	L-THREONINE 3-DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00008	SORD, gutB; L-iditol 2-dehydrogenase	EC:1.1.1.14	Fructose and mannose metabolism	ko00051	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.