Detailed information of RMX40527.1 in Pocillopora damicornis

Genomic Location: SczhEnG_3631:87825...107578
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80WM5Hyaluronan and proteoglycan link protein 3 OS=Mus musculus OX=10090 GN=Hapln3 PE=2 SV=3
P98065Tumor necrosis factor-inducible gene 6 protein OS=Oryctolagus cuniculus OX=9986 GN=TNFAIP6 PE=2 SV=1
P98066Tumor necrosis factor-inducible gene 6 protein OS=Homo sapiens OX=9606 GN=TNFAIP6 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008
all species →
EGFEGF-like domainDomainInterproscan
PF00193
all species →
XlinkExtracellular link domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016186
all species →
Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR016187
all species →
Homologous_superfamilyC-type lectin foldInterproscan
IPR000538
all species →
DomainLink domainInterproscan
IPR003609
all species →
DomainPAN/Apple domainInterproscan
IPR043210
all species →
FamilyCD44 antigen-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10225
all species →
HYALURONAN RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005540
all species →
Molecular Functionhyaluronic acid bindingInterproscan
GO:0007155
all species →
Biological Processcell adhesionInterproscan
GO:0004888
all species →
Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for RMX40527.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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