Gene detail

Detailed information of RMX40596.1 in Pocillopora damicornis

Genomic Location: SczhEnG_3627:58300...63067
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PCF8	CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis OX=8355 GN=cisd2-a PE=2 SV=1
Q5I027	CDGSH iron-sulfur domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=cisd2 PE=2 SV=1
C1C524	CDGSH iron-sulfur domain-containing protein 2 OS=Aquarana catesbeiana OX=8400 GN=cisd2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10660 all species →	MitoNEET_N	Iron-containing outer mitochondrial membrane protein N-terminus	Domain	Interproscan
PF09360 all species →	zf-CDGSH	Iron-binding zinc finger CDGSH type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018967 all species →	Domain	Iron-binding zinc finger, CDGSH type	Interproscan
IPR019610 all species →	Domain	Iron sulphur domain-containing, mitoNEET, N-terminal	Interproscan
IPR045131 all species →	Family	CDGSH iron-sulfur domain-containing protein 1/2	Interproscan
IPR042216 all species →	Homologous_superfamily	MitoNEET, CDGSH iron-sulfur domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13680 all species →	CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0051537 all species →	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan
GO:0005741 all species →	Cellular Component	mitochondrial outer membrane	Interproscan
GO:0010506 all species →	Biological Process	regulation of autophagy	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23882	CISD2; CDGSH iron-sulfur domain-containing protein 2	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.