Gene detail

Detailed information of RMX41349.1 in Pocillopora damicornis

Genomic Location: SczhEnG_3512:253274...261574
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-pdam_00012792

TTTCATCAGCTGGAATCTGCACGCCTTGCAGCATTATAGGTTACTAATAGTTTAGGATGGGAACTTGTTTTCCTGTGGAAAAAGCTCTTTCACTTTTACTGTGTGAGCGAGATGACATGTAAGCTGACTCGTGATTTGAAACATGTTTCGTTCGTCGCGATTGTTGCAAATCACTGCCTTGTTTGCGTTGTCGCTTGGCGCAGGAACTCTCCTGTTTCTAACAGCGCGATATTTGAAACGGAAGCGCCGTGAACCATCAACAGGAAAGAGCTCATCGTACAACGATCGGCCtttgagaagaaagagaaCTTTCACAGCAGGGAGCTCAAAGATATCTGCAGCTGGTGAATCTTCCAGACACACCCCTAGAAGTACAACAAGCTTAGATAATGAAGTTGTGTTCCGAAGACATGCAGCAAATCTTCAATCACCAAATGCTGCATTGGATGATGGTGTTCTAGTTAATGATGGAAGGGTTTCTGAAGATAGTGCTATTGACCTAGGAGATGTTATCacagatgaagaagaaattgttGAGGAGCTTATAAAGAGAGGTGTTGAAAACTTTGACATGGCATTGGAACATTGGTATGAAGCTACAGATTATGTGATGGAATGGCGGCGTCCAGGTCTCTCTCAGGGAGGAAAAAACTCATTCTTCCTTATTGAAGCGGACAAAAAGCTGAATGCCTTGATTAGTGGTTCCAGAAAGCTGCGGAAAGTGATTGAACAGTATGATCTCATGGAGACACCTTTAACACGGACACCAAGCAACATGTTGACATGGATTGATGATGGGAGTTTACAGGAGCAAATACCCTTGGAATTCAGTGAAGATCTGGGGGATCAGAACTCTTCTGATGCTGATTCCTTTGTGTCTGCATCTGATAATGCACAGTTAGAGTTTGACGATATCACTGATGAGAGACTTGTCAATGAGTCACAGCGACTGAAGCTGTTTAGGGAAGCTGTTCTTCATACAGCTGGAAGTCATAGTCACCTCGAGTTTTATGTGTCTGGACTTCAACATTACATTCGTCATGGTATCTGCTGTCGTAAGATCAGaacaAATGAGGTGGGATGTGAAAGTGACATGGAATTTCTTGCCAAAGTTCACTGTGTGAGACAGGCTTCTGagatggtGTTTTTGTCTTCAGAAACACGACAGTGGTTCATTGATGCTGGTAGACAAGCTTTGTCAGCTGTCATTGAAAGTGCAGGCAAGGATCCATCTGACTTTCAAGCAGCATTTGATGAGTTGGTGGAGTACTCGTCATCAGCAGAAAACTGGGGGCAAATCAAAGAGGAGCTGAATGAGAGAGGAGTGGTTGAAATTTCGTTCTATGACGTACTTCTGGACTTTGTACTATTAGATGCATTTGATGACTTAGCCACCCCTCCTTACACAGTAGCCACTGCTGTTCAAAACAGATGGTTGTCAGCTCGAATCAAGGAAACAGCCCTTACAACAGCCATCTGGGGAGTTTTAAAGGCTAAAACTTCTTATCTTAAGGACCCTTACGGTTTCATGGCTCATTTCTATGTAGTGGCGCAGTATGTTTCTCCAGTTCTCGCTTGGGGATTCCTGGGATCAGatgacaaactgaaaatagtCTGTGAATACTTCAagAGCCTTATCCTTGATTTCATCAGGGACTTGTTTGACTTCACAACCAGTGATTATTCGTCAATTGAAAGCTTGTGCGACTCAATCGTGAGGCTGGCCAAAGAAAGAAGCGAACAGTTATTGAATAGCGATACCTGTGAAACCAAGCTTCTCCAAGCAGCTGCTTCTTTTGATGAAACACTGATCGAGGCACCGACCACTCCCAGCAAAGAAgttcaaaaaaatgaagaacacGTCTAAAGGAGGACGTTTTCAATTCAActtgacaaaagaaattttttttaaccatgtCTCCGAACCTTGttaatcaaaaagaaaaatgacttgCGTGATGCTAAGAGTGGAAATAGCGCGATGAAATAATTCGGATTTCTAATTTAAGGCCAATTACGTTGAAGTGCAAGATTTTGGGAGTATCTTTGAGTATATTTTTATCTTGGAGGGAAAATCTTGCTACTCAGCGGATCATAAATCTTGGTAATTCTTTtaaataggaaatgatcataagatatttcattttattgttggTGGCTAGAAAATTGGACATCTTACTTTTTCTCGAGTTCTCCTGATATTCCTTGTCTATTTCGTATCAAGAGTCACTTTTCCATGCCAGTTTTGGCAAGGTCAGAAGACTTGGAGGTGAAATGGCTTGCCAGTTGTACATATGAGTAACAGTGGATGTACGGTGTGAGCATTTTTTAAGGATTCATGAGTACAGAGCTATACAAAGATGCTTGTgacttgaaacaaaagtattCGGTTTTGTGTCCCCTCTGAAAGACAatatcattaaattattttagtgtTTCAGATGAGTGTAATGacatttttgttactgtttcttatttattattacctacaaaataactttattcaTCCCTTATGgcgaaaaaaacacatttttctgATCTCGTCAATTATTCCAGCCTCACCTCTTTGTTTTACTaccatgagtgatcaagacagaatttcttcttacaatatcaatgcaatatcaagcaga

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5XJS0	Mitoguardin 1 OS=Danio rerio OX=7955 GN=miga1 PE=2 SV=1
Q9W3F7	Mitoguardin OS=Drosophila melanogaster OX=7227 GN=Miga PE=1 SV=2
Q6GR21	Mitoguardin 2 OS=Xenopus laevis OX=8355 GN=miga2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10265 all species →	Miga	Mitoguardin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019392 all species →	Family	Mitoguardin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21508 all species →	MITOGUARDIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008053 all species →	Biological Process	mitochondrial fusion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27289	MIGA, FAM73; mitoguardin	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.