Detailed information of RMX41498.1 in Pocillopora damicornis

Genomic Location: SczhEnG_3492:168714...180090
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80XJ3Tetratricopeptide repeat protein 28 OS=Mus musculus OX=10090 GN=Ttc28 PE=1 SV=3
Q96AY4Tetratricopeptide repeat protein 28 OS=Homo sapiens OX=9606 GN=TTC28 PE=1 SV=4
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12770
all species →		CHATCHAT domainDomainInterproscan
PF17874
all species →		TPR_MalTMalT-like TPR regionRepeatInterproscan
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13181
all species →		TPR_8Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024983
all species →		DomainCHAT domainInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR052699
all species →		FamilyRegulatory & Mitotic Spindle AssociatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10098
all species →		RAPSYN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12600SKI3, TTC37; superkiller protein 3-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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