Gene detail

Detailed information of RMX42002.1 in Pocillopora damicornis

Genomic Location: SczhEnG_3433:1258810...1262088
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3B752	Thymidylate kinase OS=Danio rerio OX=7955 GN=dtymk PE=2 SV=1
Q0WW55	Thymidylate kinase OS=Arabidopsis thaliana OX=3702 GN=ZEU1 PE=2 SV=1
Q54GN2	Thymidylate kinase OS=Dictyostelium discoideum OX=44689 GN=dtymk PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02223 all species →	Thymidylate_kin	Thymidylate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018094 all species →	Family	Thymidylate kinase	Interproscan
IPR018095 all species →	Conserved_site	Thymidylate kinase, conserved site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR039430 all species →	Domain	Thymidylate kinase-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10344 all species →	THYMIDYLATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004798 all species →	Molecular Function	thymidylate kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006233 all species →	Biological Process	dTDP biosynthetic process	Interproscan
GO:0004550 all species →	Molecular Function	nucleoside diphosphate kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006227 all species →	Biological Process	dUDP biosynthetic process	Interproscan
GO:0006235 all species →	Biological Process	dTTP biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00943	tmk, DTYMK; dTMP kinase	EC:2.7.4.9	Pyrimidine metabolism	ko00240	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.