Gene detail

Detailed information of RMX42868.1 in Pocillopora damicornis

Genomic Location: SczhEnG_3263:459975...461848
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SLW1	Branched-chain-amino-acid aminotransferase OS=Nematostella vectensis OX=45351 GN=v1g246094 PE=3 SV=1
P24288	Branched-chain-amino-acid aminotransferase, cytosolic OS=Mus musculus OX=10090 GN=Bcat1 PE=1 SV=2
P54687	Branched-chain-amino-acid aminotransferase, cytosolic OS=Homo sapiens OX=9606 GN=BCAT1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01063 all species →	Aminotran_4	Amino-transferase class IV	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043132 all species →	Homologous_superfamily	Branched-chain-amino-acid aminotransferase-like, C-terminal	Interproscan
IPR005786 all species →	Family	Branched-chain amino acid aminotransferase II	Interproscan
IPR036038 all species →	Homologous_superfamily	Aminotransferase-like, PLP-dependent enzymes	Interproscan
IPR001544 all species →	Family	Aminotransferase class IV	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11825 all species →	SUBGROUP IIII AMINOTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004084 all species →	Molecular Function	branched-chain-amino-acid transaminase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0009081 all species →	Biological Process	branched-chain amino acid metabolic process	Interproscan
GO:0009098 all species →	Biological Process	L-leucine biosynthetic process	Interproscan
GO:0009099 all species →	Biological Process	L-valine biosynthetic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for RMX42868.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.