Gene detail

Detailed information of RMX44161.1 in Pocillopora damicornis

Genomic Location: SczhEnG_3058:728642...736766
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-pdam_00002547

ATAGTTTTTCTAAGAAGAAGGcgcacaaaaaaatatattgtgtCAGGTTGGAGTATTACAAATTTCGTCCgcattatttcaaatgattaTATAGATCTCGTTACTCACCCACTACTAAGCTTTCGAAGACGAACCTGATTACTTACAAACTCAATCGCTTCGAAGTGCTTGGTAGCCAAGCTTTATCACTGTTTCCCTTGGGGTATTCTTCACCGTGTATCACACAGCGGTAATCAGACTTTTTCTCACAGCGTCACTTCTGTCTGTGAGGAAAGAGGCTAATGGTTATAAATACATGTGGGTCAGTCCATATGTCAGAAGCAGAACTGGAAGGTTGTTATTAGAGAGACTTGCTGAAAATGACAGCCAAGAACtggaaacagagaaaacatCATGGTACAAATGTGAAAGTGAAGCTTTGTTGGAAGAGCTACAAGCTAAGTTTGTAGAGAGCTCACTGGATCAAGAAACTGAAGCTTTCTTACAAAACTGTCATGAGAAAGCTGATGCAGTGTTCACGCAGATTGGACATCTTCTGTTCAAAGGGttctttggtttctttatGTCTGTGACTACAGCAAATGGAATTTTGGATCGAGGATCaatgtttgtattttctgATGCCCAGTTTCAAAGACTCATGAATGTAGATGGATCATGGAAGACAGGGACTATGTTAGACTTAGGAGCTGGTGATGGCAAAGTAACAAGTGTTATAAAACATCACTTTGATGAAGTTTATGCTACAGAGCAGTCTCCATCCATGAGGTGGAGACTCCAAGACAAGGGCTTCAAGTTACTTGATGAAAGTGAATGGATGAAGGTTGATTTCAAGTTTGATGTGATTGCATGCCTAAACCTGTTGGATAGGTGTGACAAACCTCTCACACTACTCAGTGACATTAAGGAAACTCTACATCCTGAAACAGGCCGCCTGATTGTTGCAGTTGTTCTTCCATTTAGACCCCTTGTGGAATCAGGCACAAAGATGATTCAGCCAAGTGAAGTTATAACAGTTCATGGAAATTTATGGGAAGAACAAGTACAAAGTCTTGTTTCTGATGTGTTTGAGCCAAGTGGATTTACTGTGGAACTGTTTACAAGAGTTCCATATTTATGTGAGGGTGATTTGTATAAGGATTTTTACATTCTGGATGATGCTTTGTTTGTTCtcaaaatatcacaataaGGCAGCACAAACATGCGCTTCAAATTGAGTGAAGGGAATAATATTTCCACAGAAATGGCATTAATGACCCAAATGTTTAAAACGTAGAGCTAGATGAGTATTTACTTCAAATATGCCTATTGTTTTCTGTACAAGGAAgtgtattttaatatttttatttacaaaatttcatttcttacCAAATTTTTACAACAGTAAAATTTATGGTTTTAAATTATCcttatttcaaaacagcaaATAACAGCTATTTTAACAagagaataaaatttgcaGAAAGCAGTGCTCTAGCAAcaagcaaaatgaaatctaTGCAATTGCCACATTACTTCCTTTGAACAAGTCATATTGATTAATACGCAACTGACCTACAAGCGGGCACTGTAGAACATAAAGAGACAAGCCACCACAGGCCACATGTTTCCATGTGTGTTGCAGCACCTATTTTGTTCTTGGGTTGTAAATCTCACTTGTTCACAGGAATTTGTCATATCACAACAttcaatttttagaaaacaatgcatgcattttaatacttttaattagtaattaggttgtttttaaacaaaatacacTAAGGGTGGGTATTTCTAACccagttttatttgatttaacatCGGCATACATTCTAGTACTATTTAACATTCTGTATAGAGTGTGCTAAAACAGGTAACTACATATTTATAAGGGCAATAAAGTTCAAATTCAATAGAAAGTCTGTTATGGTATTTTCACAACAAGAGCCTGAGCTTTACttaatttaatgttatcaAAGAGAATTTTTGCTCCCCTCATCTTCATTTCACTGTCAACTTCAACCACTCCTGAACCACTGATGCTATCAAGTGAACCTGTCCAACTCTCCTGCCCAAAGTTTACTATTATGAGAAATTTGCAGTGTTTGGCTGACCTGGTATAAGCAAGAATTAAGCTATCTACATGAACAACTTTGAAACAAAGTTCTTTAAGGCATCGTGAAGAAGACCTTATCCTCAGTAGTTCTCGATACAGCTGTAAAACTGAAGTTGGATCTGCCATTTGATCCTCTACATTcactattttgaaattttttgcaacAGGTAGCCATGGTTTCATTCCATGGGTAAAACCAGCATTTTGTTTACTGCACCACTGCATAGGTGATCGTTGAGGATCACGGAAATCTTTGCTGGTTTTAAGAGGCACTTCAGCATCTGTCATTCCAATTTCTTCCCCATAATAAGTGACAGCAGTTCCAGGAAGTGTAAGAAGGAGAACGTTTAGTGCACGGGAGTACTCATGGCCAACTTTGGTACCAATTCTGGATACATCATGGTTTCCTAATAACCAATTGGGCCACTTCCCCCTGGGTAGGGCAGTAAGGTAATCAGAGATTACTTCATACAAATCTTGTGCAGTTGTGGATTTGGAAAGCCCCAAAAACCCAAAGTTAAAGGGGAAATCAAATTCACTGTATCTCCCACCATAATACTTCATAACATCTGGAAGATCTGCCATTATCTCCCCTATGAGTATTCTGTATGGCGCCTTGTACTGATTGAGAAGTGTTCTCCATTCCTGAACAATTTTGTGATTATCCCACAAGTTTTTCGTGTAAATGTGCTCCAAGTGATCATAGTTGGGACATAAGGGATCATACTCAGGCTTAGTGGGTTcatcaagaaattttgaatcctCAACAAGATGAGGAACTGCATCAACTCTAAATCCATCAACTCCTTTGTCAAGCCAAAACATTAGCACTTCCTTCAAAGCCTGGCGCACCTCAGCGTTTCTGAGGTTCAGATCGGGTTGTTCAGGACAAAACTGGTGCAAATAATACTGTCCTGTTCTGGTATCGTAGCTCCATGCGCTTCCCCCAAATACACTGACCCAGTTATTAGGTACCCCACCCCCTGGGGAAGGGTCATTCCAGACATACCAGTCTCTTTTAGGACTCTCTCTACTGGCGCGACTCTCAAGGAACCATGGGTGTTCATCTGAAGTGTGGTTAGGTACAAAATCCAGCACAAGTTTCATGTCCCTTACATGCATCGCTTTTAAGAGTTCATCAAAGTCATTCAGATCTCCAAAGAGAGGATCAATGTCTGTGAAGTCTGAGATGTCGTAGCCATTGTCCACCATAGGAGATTTGAATATTGGGCTCAGATATAAGATTTTGATCCCCATGTATTCAAAATAGTCCAGCCTGTTCATTATTCCCCGTAAGTCGCCATTTCCATCGCCACTCGAGTCTTGGAAAGATCGAGGATATATATGATAAATTACGCTCTCTTTCCACCACTTTTTCCGCTCATTCTGCTCTTTTCGCGCTTTGTATCCCTTCAATAGAGTAAAAATCACTGCGTTTAAGATAATTGCAGCTAAAATCGCCACAATCATAGGCCACATTGCACCTAAATCCTCGGCcaccatttttttc

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05219 all species →	DREV	DREV methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007884 all species →	Family	Protein-L-histidine N-pros-methyltransferase	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12890 all species →	DREV PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0106370 all species →	Molecular Function	protein-L-histidine N-pros-methyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for RMX44161.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.