Detailed information of RMX45599.1 in Pocillopora damicornis

Genomic Location: SczhEnG_2823:15363...30536
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01388
all species →
ARIDARID/BRIGHT DNA binding domainDomainInterproscan
PF08169
all species →
RBB1NTRBB1NT (NUC162) domainDomainInterproscan
PF11717
all species →
Tudor-knotRNA binding activity-knot of a chromodomain FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001606
all species →
DomainARID DNA-binding domainInterproscan
IPR036431
all species →
Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR002999
all species →
DomainTudor domainInterproscan
IPR016197
all species →
Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR012603
all species →
DomainARID4A/B, PWWP domainInterproscan
IPR025995
all species →
DomainRNA binding activity-knot of a chromodomainInterproscan
IPR051232
all species →
FamilyAT-rich Interactive Domain/SWI1 Chromatin RemodelingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13964
all species →
RBP-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0000976
all species →
Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for RMX45599.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP