Gene detail

Detailed information of RMX46870.1 in Pocillopora damicornis

Genomic Location: SczhEnG_2555:56819...62349
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-pdam_00022075

TTCCTGGCACACTCGACAGCGGCTTTGTTATGTCACCGACCAAAGAAAGGGATAAATCTCAGCTGACTATGCTGGTGCACGTGAAATCATGGATGATTTAATATGCAGAAGAGAAAATGTCCTCCTTTTCATACCCAACTTAATAGGGTATGTGCGGGTTATCCTTTTATTTGCATCGTGGATCTTCTTCAACAATCCAGTCCTCTTCCTGTGCTTTTACACAGCTTCAGTCTTGCTGGATGGTCTAGATGGAATTGTTGCTCGGCaattgaatcaaacatcagcATTTGGAGCATGGttggaTGTTGCTACAGACAATCTCGGCAGAGGAATGCTTTGGACCTTGCTTTATAAGTGGGGATACTTTATCAGTGCAGTGGAGTGGATGGTATTTGTGTGTACACATTCACTTGGAGCACATTGGAAGAGTGCTCAATCCAACCCACCTTCATGGGTTCAACTTGTTATGGCTAAAGGATTTAAAACACCTGCAGGAGCATTTGCAATCTGTGGCCTTCATGGGCTCCCTGTGTGGTTGTATGGTACGAATAAACACATGTGGTCACCATTCATGTCACATCACTTACAGTTGGGAGTCACTGGAATTTTAGTGTCTGGTAGAGCCTTGTGCATGGGAGTTGAGGTTTGGTTTATTACAAGTCACATTAAAGATTTACTGGCAGATCATGAACAAAAAAGGCCCTTATCAAATACAGAACCCATGATGGAAGACACTGATTAAAGATGCATGCTATCTTGAAATCTGTCATGCCAGCTGGTGGCATTTAAAGATAGCTTTTTCATCctgaaattcttaaaaaattcagcgCTAATAAAAACTGAGCATTTTGTACCTTTCTTATCACTGAATTATTCTAGGAATTGTAAGTATTTTTTCTGATCATAAAAGTTTCCACCTAGGGACATTTTAACATATATCAAATACTGAAGATGTAGCTAAATGAAGCCCAAATAACTATGACTGAAAAAGAGGTGCAAACTTTGAATATGAAACCCAGAGCCTCacataacaatgataaaagtTCCTAGTTatcaattgaaattattttatatatatcaATAGACTATTATTTGCCACATGACTTCTTTCATATATGGCTgagatcttttaaaattattttattgattaatttgCATGTCACTTCATCTTCTTTCCCTCATTATCATGTGGAAATAAATTACATTAAACGTGTTCACAAGTCTAGGAAGgctaataaaaaaacaagtcAAAGAGTAACAACAAGCCTCTTCGGCTGTCAATGTGAGATGTCTCtacagtgaaaagaaaaacatcccAGAAATCAAACTATACTATTAAAtaagacagaaaaaatgtGCTCTATGGTAGACTCACAAGTCTGTAGTTGTTTTATTACCTGTATCCTGCAAGTAGGCCCTCATGGTATATCTTTGCCCACAAAGTAAGCTATTCAAGGCCTTGAGAAAAGCCAGATTAGGAGAGATCTACAAGGGATCTGGCACTAATAGTGGAATTCAGAAAATTTGTAAGGGGGTTGAGCTTTTCGCTTCATCTCGACGAGAATTAACGTTTTACTCTACTGCTGCCACTTGAGTATTAAAACAGTAATAAAATGTGATCATATTCAAGTATAGTGTACTCTGCTGATCTTACCTTGACAGGACATTTGAAGGTTAGATACACAACGTGATACATCGATTGAAAATGGCGGAAGTATGGCTGGGTTTATGAATATTgtactaaaaatttttgtcgATCATTTGGACAAGGTTGGGCTAATTTATAAGAGAGATATTGGATCTTTCTTAAGCTACAAGGTTGGTAAAGGTCACAAAACAACACTGCCTCCATCAAAGTCTCATGTTACGATAAATCCGCAATTTCTCGAGGGCAAGAGAGTTCTGTTCGTCGGGGATGTCCATGGCTGTTTTGACGAACTGCAAGAGCTGTACAATGAATGTACAGATCCCAGCAAGGAAACTCTGTTAATTTTCGTGGGTGATCTCGTGTTTAAAGGACCCAAGACTCTAGAAGTTATACGTTTTGTTAGAGAGACAGGCTCGTTTTCCGTCAGAGGGAATCATGAACAATCTATTTTAACCGAAATCCTTCacaaaagaagaaacgaaCCTGTGCGAGAGAAACGCAAGTTTGTGTACGATTTGACTCAAGAGGACGAAGATTTCTTGCAAAATCTACCTTTCACGATAAGTGTACCTTCATTCAATGTCCTAGTGGTTCATGGCGGACTGCTGCCTGGAATACCTGTACAACAACAAGATCCTTTGGGTATGATGTTCATCAGAAACTACATTCCAGAGAAGTTCCAAGGAACAGCAGGAATTGAGGAAGGCTTGCCATGGGCGTCAACGTGGAGTGGTCCTCAGCATGTAGTATTTGGACACGATGCTCGCCGAGGTGTGCAGCAATACAAGTATGCGACTGGGATTGACTCTGGATGTGTGTATGGGAATTATCTGACTGGCATCTTAATAGAAGACGGTATCTGGGCTAATAGGAAATTGGTACAAgtcaaagcaaagaaaaaatacactCTAAAAGAGAGTTGACTTTTGTCGAGCTATACTATTGAGATGTAGAAtatgactttcttttttcaagcaGACCAGTGGACCTAAGTACTCAAAAGAGAGACATGATAAGGttttacaacaacaattaaaattttacccAATCACTAATTAAGATTCACATGTTAATGCAAGAGTTTGAAAAGTCTTCTAACCTGTGGTTGGTAGAGAAAGCATAATTTTGATGAGTGAGCACTCAGTATTTTCCTGGTACAAATCATAACTGCCAtccttgattttttaacaGCAGGGGAAGGCTAGGAATGGAAAGAATCCTATACCAAAGGAGTGAGAGACAGTCAaaaggagggggagggggtgagGCAATAGAAATCTTCTCACCTTCCCTTCCCCTTCCCTTGATGTGCAATATCCTAACAAATCTCCATATTTAGCTCTAACCAAGTTCAATCATTATttgatcatttaaaaaaatcaaagggcTTTTGGAACCAGCTCATCCATGTTATGGCTTAAGTTTGTATTGATTTCTTGGACTTGTTGAATATATGTACAGTTGAATTTGGTTTATTTGAACTTTCAGACTTCtggaataaattttcttttatgttttggGCAGTTGTGTGATAAGAAAACTTGTGCATTTGTTGTGATGGGAACTGAAAAAAGGTTGTGTGGGCTGGAGGTGGGATGGGCAGAGGTCATTAGGCAGACAGTGTCCT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00149 all species →	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029052 all species →	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR004843 all species →	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan
IPR050126 all species →	Family	Diadenosine polyphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42850 all species →	METALLOPHOSPHOESTERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0000298 all species →	Molecular Function	endopolyphosphatase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006798 all species →	Biological Process	polyphosphate catabolic process	Interproscan
GO:0016791 all species →	Molecular Function	phosphatase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for RMX46870.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.