Gene detail

Detailed information of RMX47231.1 in Pocillopora damicornis

Genomic Location: SczhEnG_2459:63614...72608
NR annotation: no NCBI-NR hit recorded
Species abbreviation PDAMI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21178 all species →	Itf52_C	Intraflagellar transport protein 52, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR039975 all species →	Family	Intraflagellar transport protein 52 homolog	Interproscan
IPR048643 all species →	Domain	Intraflagellar transport protein 52, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12969 all species →	NGD5/OSM-6/IFT52	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0030992 all species →	Cellular Component	intraciliary transport particle B	Interproscan
GO:0042073 all species →	Biological Process	intraciliary transport	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19681	IFT52; intraflagellar transport protein 52	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.