Gene detail

Detailed information of RMX47759.1 in Pocillopora damicornis

Genomic Location: SczhEnG_2378:29999...46438
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-pdam_00011771

CATTTTATAACATCGAACCAAAAACAGGCGGGAAATAGCCAGTTGGACCCAGTCCTTATCGTGCAAAAcgtgattaaaattttagagcCTGGAAGAATATGTGATCATCTTTCCCCGAATTCATCAATGACTGAAAGGTTAAGGACCAAAATCAGAAGACCATGACAATGTTTATACGTGTGTGTCAAAGATCTGTAGCCATAGACGGCTGCCTTCATCTTCGGCGGGCATTTCGAAAGTGTACGTGTTTCTTTGGACCATTGTCGCGGTATGTAAACAGCGCCAGTGGAACACACAGTGTTTCAGATGGAGATGTGATATACCAAACCTTCAAAAATGAAGATGGAAACGTTTCTGTTGCAAAGTTCATAGCTgctCTGAAAGAAGCTGGTTTTAGAGTCAAGGATAGAAGGCTGCAAGAAACAATGGCAAACTTTGCACAGTAtttacaacaagaaaattttgaaggatttGTGGATGAGACAACATTCAGAAGatcAATCAAAAAGAATATTGTCCTAATAGAGAAAGCACTTCGGGGAGATTTTGTGATTCCAGAATTTAGTCAGTTTACTAAACATATTGAGGAAATATATCACAAATGTAAACCAAACAGTGGAGGAAAGGTTGCTGACTATATCCCACAGTTGGCAAAGTTTGATCCTAACCTCTGGGGTGTGGCTGTTTGTTCAGTTGATGGGCAGAGaTTTTCAATTGGGGATGACAAAGAACACTTTTGTCTTCAGTCAGTATCCAAATGTCTTCACTATCCAATAGTTTTGGAGGACTTAACAGCAGAAGTGGTGCACAGATATGTAGGACGAGAACCCAGTGGTCAAACATTTAACTATTTACACCTGAATAGCCAAGACCGACCCCATAATCCAATGTTGAATTCTGGTGCTCTTGTTCTGTGTGCACTTCAAAAGCCTGAATGGCCATTGGCAGACAGATGTGAATATgttcaggaaaaatttaaacatataGCTGGTGGGGAATACATTGGATTTAGTAATGCTACctttttatcTGAGCGTGAAACTGCTGACAAAAACTATGCTCTGGGATACTACATGAATGCTCACAAGGCTTTTCCACCTAACACAAATCTGATGGATACTTTTGAACTCTACTTTCATacTTGCTCCACGGAAACAAACTGTGATGCTGGTAGTGTTATGGCAGCAACCCTGGCAAATGGAGGAATTTGTCCTTTGACTGGTGAAAAAGTATTCAGCTCACAGACTGTACAACATACACTGTCTCTCATGCTTTCTTGTGGACTGTATGATTACTCTGGACAATTTGCCTTTCATgtagGCTTGCCAGCCAAGTCAGGTGTAAGTGGTGCAGTCTTGATAGTTGTGCCTAAAGTTTGTGGTATGATGGTCTGGTCACCACCACTGGATGATCTAGGTAACAGTGTCAGAGGAATGCAGTTTTGTAagGAACTTGTCAGCTTGTTCGATTTTCATAACTATGACTTAAAGGGTGCTTCGTCAGGTAGAAAACTGGACCCTCGCAGAAGAAAGGCTGAAGTACAGggagaaaaagttgtttctcttctttatgCTGCAAGTTATGGAGATGTAACAGCCTTAAGGAGgtGGGGATTTTCACCACTTGACGAAGCAGTACGATTTGACCATCAGGCCTGCGTGGACCTGATAAAACACCATCTTCAGTTACAAGGAAAAACTATTCAGTAATTGGTAGAGCCTTGTGATACATAAAGTTGACCAAAAGGATCAATTCCTAGGTATAAAATATGAgtttaaaaaccattttatttgtaaaatttgaagtGACCTCACTGAAATGATATACTGCATTCCTAAAATAAACACTTATGTTCTCTAATAAGGGCCTTCCCCCAAAAAGCACTTTCCCAGGAATAAGTGCCCACCCCCTAAGGTCATATTTATCAAACAAGTGCCTCACTCCTCCTCCCTTTCTCAAATAGCAGGGATGAAAGGCAAACTTGTTTCTATTTCCACCTtgtttataaattttcaagctTCAGTACAGAATAATAATTGATTAATAAGCACCCTCCTCAATTGGGGGCACTCTCCTTCCAATAAGTGCTCCTCCCCTaggctgaaattttaaataagggCCTGAGTGCTTATTCACAAATTACGGTGTGCACCAAAATGCGTGCAGCAATGCattatagagaacagttaCTTGTAactaagttattttatttatcattcaaagttttaaatatcaaCAAACAATGTAAGGTTAAAGGTACTAgtgtgaaaaaaggaaagttccTTAATGCAAGTGTGTTGCAAAAAGCAGGTGTTATATCCAAGTAAggataattatatatttttgagaaatttgtttgaaactACAGAATACCAAATCTTAGCCAGTTTTATCCCAAAGggaacttatttttttaaaatggaacTGGCTCTCACGCTTATTACAAACTTATCATAATTGACAACTTTCAAAgacaatgaaattaatttaatcacATGATAATATTATTAAGAGTAACATTAATATATAACATAATCTGCTTTACAAAGCATCCTCTCTACTGAATGAGGGTTTGATCATGGCTAATACATACACTGTAGCTGATAGTCTGTTGTACTTTACTGAACTGAACCATAAAGTATTTGTGTTATTATTGGTCAATTTAACAGGCCATATTTCACAGTGCAGCCtactaaattcaaaagcttCAGGGAAATTATTAATATCTCACTAACCTTGTTTTCTTGGTCTGTACTCAAAATACCAGAACCTTATATTTTCCACTTAGACTTATGGCCTGCATGCTTCATAATTGCCACTCTTATCTAAATGAACTCATTGCATGGGACTCATGTGAACACAAGCTATTGTCTAATGATAATAGTGGCAACTGTTTGACATCATATAAGCCAAAATAGCACCTTCTGGGAAATTGAGGCATTAATGTTGCTTCCATTTGTTTACAGTTCTTATGCATTTCAGgttttttcccaattttccAAGGGGAATCTTCATAGAACAAGTTATTGTCATCGCTTTAACAGCAATTTTTCCTGGAAAATTCccttaacccctaagagtgactaacatctaatttctcctttcagtatCATCCtagaatcaaacatttagatAATGAGAGTTAAGGAAATGGTTATTGACTAAAGAACTTTATGTTTGTTAAAGTCTCGCTGTGAGTACTGCTGGAAATGTAAATAGAATAGAATGCATACTTAagtaagggtgtaaaggtttatTGTGCAGTTGCAATTAAAggtaatttaagatatttatgTTACTCATATCATTTTCCTGAAGTTATTATTCAGTTGTAGGCAAGTGATGGGAACCCAAGTCTTTACATAACCATTCATTTCAGCCACATTAGGACATAAAAACAAGatatgaaaacattgaaatgatTCACAAAATATTACTGTTACATTAATGtcatcaaaaattattgtggAGAATTTCACAAATGATCAATTGAGTTCCTTTTCCAACACACTGTATCTATAAAGTGGATCCAACTTCCCCTCTAGAGTAGCATCAGCCTCGCATAATGTTATGTGTCTGGTTTGACCAAGAAAATGTTCTGCAGCTTCCAgtttaatcagttttattcTTACCAGGTCATCCACATTGTAgtaaCTTGCTCTGTTTCTCCCTTCCGTACAAACCGCGTGAAACTTCCAGCCAAAGTCTATatacaaatcttttttcgCACCGTTGTCCACGATGTGCGTTATTTTCCCAGCCACTATTTTTCCTTCAGGTCGACCCAATTTGACAAACCTAGAATTCCTCAACATTTCTTCGAAGTTTTCGTCCTCTGTACTTCCATTTGCGCTAGAATATGGCCTTATGCTTACATTTGTGGAAAGAAGAATGGATCTACAGTTGCGTCGCAAATATAAAAAACTAGATGCCTTTCTCAAGAAACCACATGAAGCCGCCATGTTTTATAACTGCGAGGCAACCTAGCAAATCA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17959 all species →	EF-hand_14	EF-hand domain	Domain	Interproscan
PF04960 all species →	Glutaminase	Glutaminase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015868 all species →	Family	Glutaminase	Interproscan
IPR041541 all species →	Domain	Glutaminase, EF-hand domain	Interproscan
IPR012338 all species →	Homologous_superfamily	Beta-lactamase/transpeptidase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12544 all species →	GLUTAMINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004359 all species →	Molecular Function	glutaminase activity	Interproscan
GO:0006541 all species →	Biological Process	glutamine metabolic process	Interproscan
GO:0006537 all species →	Biological Process	glutamate biosynthetic process	Interproscan
GO:0006543 all species →	Biological Process	glutamine catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01425	glsA, GLS; glutaminase	EC:3.5.1.2	Central carbon metabolism in cancer	ko05230	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.