Detailed information of RMX47769.1 in Pocillopora damicornis

Genomic Location: SczhEnG_2378:193837...199068
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|U-box · all ubiquitin genes in this species
Ubiquitin familyE3|E3 activity|RBR · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11789
all species →		zf-NseZinc-finger of the MIZ type in Nse subunitDomainInterproscan
PF01485
all species →		IBRIBR domain, a half RING-finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR047552
all species →		DomainE3 ubiquitin-protein ligase RNF217, Rcat domainInterproscan
IPR026846
all species →		FamilyE3 SUMO-protein ligase Nse2 (Mms21)Interproscan
IPR004181
all species →		DomainZinc finger, MIZ-typeInterproscan
IPR047551
all species →		DomainE3 ubiquitin-protein ligase RNF217, BRcat domainInterproscan
IPR044066
all species →		DomainTRIAD supradomainInterproscan
IPR002867
all species →		DomainIBR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21330
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0016925
all species →		Biological Processprotein sumoylationInterproscan
GO:0019789
all species →		Molecular FunctionSUMO transferase activityInterproscan
GO:0030915
all species →		Cellular ComponentSmc5-Smc6 complexInterproscan
GO:0061665
all species →		Molecular FunctionSUMO ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for RMX47769.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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