Detailed information of RMX47801.1 in Pocillopora damicornis

Genomic Location: SczhEnG_2375:64356...76519
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18044
all species →		zf-CCCH_4CCCH-type zinc fingerDomainInterproscan
PF02005
all species →		TRMN2,N2-dimethylguanosine tRNA methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041367
all species →		DomainE3 ligase, CCCH-type zinc fingerInterproscan
IPR002905
all species →		FamilytRNA methyltransferase, Trm1Interproscan
IPR042296
all species →		Homologous_superfamilytRNA methyltransferase, Trm1, C-terminalInterproscan
IPR036855
all species →		Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10631
all species →		N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0008033
all species →		Biological ProcesstRNA processingInterproscan
GO:0160102
all species →		Molecular FunctiontRNA (guanine(10)-N2)-methyltransferase activityInterproscan
GO:0002940
all species →		Biological ProcesstRNA N2-guanine methylationInterproscan
GO:0004809
all species →		Molecular Functionobsolete tRNA (guanine-N2-)-methyltransferase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00555TRMT1, trm1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferaseEC:2.1.1.215
EC:2.1.1.216
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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