Gene detail

Detailed information of RMX47950.1 in Pocillopora damicornis

Genomic Location: SczhEnG_2324:216742...232562
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

pdam_00005337

ATGGCAGACATTTTTCGCTCTGCATTGAACTACATAAGCCAAACTGGGAAGTCGGACAATAACTTCGTGGGGCAGTATGTCGAGTTAGGACCTGTACAACTCAGAGTACGACGAGTCATCGCAGAGGGAGGGTACGGATTTGTTTTCGTCGCCCAGGACACGTCAACTGGCAAAGAATATGCTCTCAAGCGACTTATGGCAGGTGATGATGCAGCCAATAAAGCTATCCTAAAGGAAATAACAATCCTTAAACGTCTCAGAGGACATCCAAACATAGTGCAGTTTTATTCTGCAGCATCTTTGAGTGAAAAGGAAACTGAACATGGAATGTCTGAATTTCTTATCCTAACTGAACTTTGCAGTGGAGGAGAGCTGGTTAAGCTGCTACAGGAAAGGTATGGACAGCCATATCCACCGAACCAGGTTTTGAAGATGTTCTATCAAATCTGCCGAGCAGTTGAAAATCTTCTCATCGGTGCAAAAGGCCAAATCAAACTTTGTGATTTTGGTAGCTCAACTACTCAGCAACAAATACCTGATGAGTCTTGGACAGCACTCCAGCGTAGTCTTGTTGAAGATGAGCTCCAACGGAACACAACGCCCATGTACCGTGCACCAGAAATGATTGACTTGTACAGTAATATGCCAATCACTGAAAAAGTTGACATTTGGGCCCTTGGGTGTACTTTGTTCTTCTTGTGTTTTATGGAACACCCATTTGAAGACTCAGCCAAGCTGAGAATACTGAATGCAAAATACACCATCCCAGAGAATGACACTAAATACACAGTATTCCATGACCTTATCAGATACATGCTTCAAGTGAACCCAGCTGACAGACCAGATATAAAGGAAGTTCTTACAGGTCTTGAAGCCATTGCAATAGCCATGGATGTTGATCTTAAGGGTAAAGTGAGAGATGATCTCCCACAGTCTTCTGGAGAACAATCATCTCAAGTTGGTGCAAGTGCCCCACCTGTGTCACCATCTCCATCGTCAGGAAATTCTGCAATACTTGGTGGAGTAGTCAAAGGGGCCAACAGTTTTTTCAGTAACATAAAGGATATGTCCAACAAGGTTATGCAATCTGTGGCAGGATATGTCAAGAATGATATTGACTTGTCATACATTACATCTCGAATCATGGTAATGTCTTTCCCAGCAGATGGTATTGAGTCAACTTACAAAAACAATATAGATGATGTGAGAGATTTCCTCGATGCAAAATACCCAGATAATTACTTGATCATCAATGTATCACCCAGAACATACAGAACAGAGAAGCTTGGAGATAGGGATGGTAAAGAAGCATCAAGTGTTATTGTTGCTGCTTTTTTTGTCTTCTGTAAATTATTCAAAAATCCAAATGGAGCTGCAGACATGTTCAGTATTCGCCGCTGTGGTATTGGACACAAAGTTTCACTCACTGCTTCACAGGAGCGCTATTTACTGTACATCACACAACTGATCAATAACCAAGAATTGAAACCTCACAAGTATTCGGTGTACATCAAGTCTGTAACAATGTATCCAGTTCCAGCCTTCAACAAAGCCAGGAATGGTTGCCGTCCATTTATTGAGGTTTACAATGGAGAACAGAGAATCCTTACCACAGTAAAAGAGATTGAAAAAATGAGGGAGTATGATCTAGGTGATGGAAAAGTATCATTTCCCGTGAACCTCACTTTACAAGGTGATGTAACAGTTGTAGTATACCATGGCCGATCTACACTTGGAGGAAAGGTTCAAGGAAAAATGACTTCCATGAGAGTCTTTATGCTTCAATTCCACACTGGATTTATCAAGACTTCTGCGCATAAACTTAAGTACTCACGAGATGAGGTGGACATCAACAAGGATGATGAAAGCAAGTTTACTTCACGTTTTACTGTTACACTTGACATCACTGTTGATGCAGAGGAAGCAAGCAGTTTGCCAACTCACACATGGGACACACTCAAAACTGAGAAACTCTTCCCTCAAGTTTGTTTCTCTACAAAGGAAGAATATCTAGAATGTCAGGAAGAATTTGTAAACGCAGATGATCGCGAATCAAACATGGTTTTCAGTTCAAAATCAAATGAAATAGAAGAGGATGATGACAATGAGGAACTCCAAGTTCCTTCTGATGATGGTAACGATGGTGCAACAGGCAGTAAGCCAAACAAAAACTTCCTTTCATCGATTGACTGGAATACTGAAGGTGCAGGAACCAACAGCAGTGATGATGAGTTTGAAAATCTGCGTGACAAGGATCATGACAATACTTCTCAACAAGCACACCAGACTCATAATTTCTTCTCTGAAAGGGAAGGTGTTGGAAATGACTTGGATGAAAATTTAGACTTGTTTAATTTGAAATCACCATCAGGTGATGAATTCAATACCGACTTGCTTAATTTCAAGACTGCAGGTGAAACAAATGGTCATCTGTTTAATTTGGATGACGATGATTCAGATTCTGATGATCCTTCTTACCAGGTGGATTTGCTGAATTTAGGCAGTGGTCAACAGAATCAGGGAATTTCTTCAAAGCCGACATCTCACATCTCAGTCGTGGATGACATGGGAGTTGATCTGTTGAATTTATCACCAGCAGGAAGTAAGGATAGTCAAAATGTGGATCTTGTCAGTGGAACAGAGAAGAGCCCTCATCGAAAAATGAAACGAAATAAAAGTGCTGATGATGTTCTTAGTCCTGGACTGCATGAGGATGATGACTTCTTCAATCAGATGGGAAGTCGTAGCTCCAGCTCCAGCAGGGAAAATGTAACTTCATTCACTGTTGCTGGTGCAGATTCTGCCACGTTTGATCCCTTTCAGACTACAAGGACTAAATCTCCTGATCTGTCCTCAGGGGGTAATGGGAGGGAGCCAGCATCCTCAGACCTATTTGATCCATTCAGCTCTAAAAGTCCAAGTTCAAAGCCTTCTGATGAGTTTGATCTTTTTGGTGCTAAGCCAGGTCAGGGCAGCAGCAGTACAGAAACATTTCCACCCTTAAGCACAAATAATGGTGGATCAAACCTGAATTCATTTGATCCATTTGGAAAGACCTCCACAGAGCAAGACCTCTTTGGAATTGGTGGTTCTCAGGCTCCCACAACCACAGCTCAGGCTCAAACACAGAGCAATACTGATCTGTTTGGAGACTGGGGTGACTCATCATCAGAAACTCTTCAACCATCTAAAGTTCCATCACCAATTCCTCAAAGAGCACCAACCAGCCCAGCACCACAGAACAAACCTACAGCAACACCAAGTGATCCTTTCTCTGACTTTGGAAATTTGACATCAAATTTACCGAAGTTTCCCTCTGTTCCAACATTTAAAGCAGGTACAGCAACTTCACCCAAACCACAAAAGAAACCTGAGTCCTCCACTAGTGGCAATCCCTCTTGGTCTCGTCCAGCCCAGCAACCATCTTGGCATTCTGGGGCTAAACCAAGTGGTCCATCAAAGGTTCCACAAAAACCAAACTATGCACCCTCCTACAGTATGTCTGGTTCTTCTGGGGTATTTGGAAACTATGGACAAAAATGGAGTGCACCCAAACCAGTTGGCCAAAATGAGTTTAGTGACATTCTAAATGCACAAGGTTTTAATCGCCCAACTGCACAAGGAGCACAAGGGGCACAAACTCTAAGCTCTCTTAAAAAGGAACAAAACAAACCTGATGACCCTATCAAGGCTAAGGTTGAGGAGTGGTCTGAAGGTAAAAGAGGCAATATTCGGGCCTTATTATGCTCACTCCACCTTATACTGTGGGAAGGAGAAGACAGATGGAAACCATGTGGCATGCACAATCTTGTTCAACCTGAACAGGTGAAAAAATGGTACAGAAAAGCTGTACTATCAGTACATCCTGACAAGCTGACTGGCAGCCCAGAAGAGCCACTAGCACGTGCAATTTTTATGGAATTAAATGATGCATGGGCAATATTTGAAAAGGAGGGATCAAAACCATTATTTTAA

Transcript

rna-pdam_00005337

GGTAAAATGGCTACTCGGGACTTCTTCGGAGTttgtaatgatattgataTTCGGTCGAAATTTAACCCGCTATCGTAGAGAATGCGGGTAGAGTTAGAAACTAATGTACGTGTAGAATCCATCTTTTAGCGGTCCGGCGCCTTATATTGAACTAAACCTGAAAATGGCAGACATTTTTCGCTCTGCATTGAACTACATAAGCCAAACTGGGAAGTCGGACAATAACTTCGTGGGGCAGTATGTCGAGTTAGGACCTGTACAACTCAGAGTACGACGAGTCATCGCAGAGGGAGGGTACGGATTTGTTTTCGTCGCCCAGGACACGTCAACTGGCAAAGAATATGCTCTCAAGcGACTTATGGCAGGTGATGATGCAGCCAATAAAGCTATCCTAAAGGAAATAACAATCCTTAAACGTCTCAGAGGACATCCAAACATAGTGCAGTTTTATTCTGCAGCATCTTTGAGtgaaaaggaaactgaacATGGAATGTCTGAATTTCTTATCCTAACTGAACTTTGCAGtgGAGGAGAGCTGGTTAAGCTGCTACAGGAAAGGTATGGACAGCCATATCCACCGAACCAGGTTTTGAAGATGTTCTATCAAATCTGCCGAGCAGTTGAAAATCTTCTCATCGGTGCAAAAGGCCAAATCAAACTTTGTGATTTTGGTAGCTCAACTACTCAGCAACAAATACCTGATGAGTCTTGGACAGCACTCCAGCGTAGTCTTGTTGAAGATGAGCTCCAACGGAACACAACGCCCATGTACCGTGCACCAGAAATGATTGACTTGTACAGTAATATGCCAATCACTGAAAAAGTTGACATTTGGGCCCTTGGGTGTACTTTGTTCTTCTTGTGTTTTATGGAACACCCATTTGAAGACTCAGCCAAGCTGAGAATACTGAATGCAAAATACACCATCCCAGAGAATGACACTAAATACACAGTATTCCATGACCTTATCAGATACATGCTTCAAGTGAACCCAGCTGACAGACCAGATATAAAGGAAGTTCTTACAGGTCTTGAAGCCATTGCAATAGCCATGGATGTTGATCTTAAGGGTAAAGTGAGAGATGATCTCCCACAGTCTTCTGGAGAACAATCATCTCAAGTTGGTGCAAGTGCCCCACCTGTGTCACCATCTCCATCGTCAGGAAATTCTGCAATACTTGGTGGAGTAGTCAAAGGGGCCAACAGTTTTTTCAGTAACATAAAGGATATGTCCAACAAGGTTATGCAATCTGTGGCAGGATATGTCAAGAATGATATTGACTTGTCATACATTACATCTCGAATCATGGTAATGTCTTTCCCAGCAGATGGTATTGAGTCAacttacaaaaacaatataGATGATGTGAGAGATTTCCTCGATGCAAAATACCCAGATAATTACTTGATCATCAATGTATCACCCAGAACATACAGAACAGAGAAGCTTGGAGATAGGGATGGTAAAGAAGCATCAAGTGTTATTGTTGCtgctttttttgtcttctgtaaattattcaaaaatcCAAATGGAGCTGCAGACATGTTCAGTATTCGCCGCTGTGGTATTGGACACAAAGTTTCACTCACTGCTTCACAGGAGCGCTATTTACTGTACATCACACAACTGATCAATAACCAAGAATTGAAACCTCACAAGTATTCGGTGTACATCAAGTCTGTAACAATGTATCCAGTTCCAGCCTTCAACAAAGCCAGGAATGGTTGCCGTCCATTTATTGAGGTTTACAATGGAGAACAGAGAATCCTTACCACAGtaaaagagattgaaaaaatgaGggAGTATGATCTAGGTGATGGAAAAGTATCATTTCCCGTGAACCTCACTTTACAAGGTGATGTAACAGTTGTAGTATACCATGGCCGATCTACACTTGGAGGAAAGGTTCAAGGAAAAATGACTTCCATGAGAGTCTTTATGCTTCAATTCCACACTGGATTTATCAAGACTTCTGCGCATAAACTTAAGTACTCACGAGATGAGGTGGACATCAACAAGGATGATGAAAGCAAGTTTACTTCACGTTTTACTGTTACACTTGACATCACTGTTGATGCAGAGGAAGCAAGCAGTTTGCCAACTCACACATGGGACACACTCAAAACTGAGAAACTCTTCCCTCAAGTTTGTTTCTCTACAAAGGAAGAATATCTAGAATGTCAGGAAGAATTTGTAAACGCAGATGATCGCGAATCAAACATGGTTTTCagttcaaaatcaaatgaaatagaaGAGGATGATGACAATGAGGAACTCCAAGTTCCTTCTGATGATGGTAACGATGGTGCAACAGGCAGTAAGCcaaacaaaaacttccttTCATCGATTGACTGGAATACTGAAGGTGCAGGAACCAACAGCAGTGATGATGAGTTTGAAAATCTGCGTGACAAGGATCATGACAATACTTCTCAACAAGCACACCAGACTCATAATTTCTTCTCTGAAAGGGAAGGTGTTGGAAATGACTTGGATGAAAATTTAGacttgtttaatttgaaatcaccATCAGGTGATGAATTCAATACCGACTTGCTTAATTTCAAGACTGCAGGTGAAACAAATGGTCATCTGTTTAATTTGGATGACGATGATTCAGATTCTGATGATCCTTCTTACCAGGTGGATTTGCTGAATTTAGGCAGTGGTCAACAGAATCAGGGAATTTCTTCAAAGCCGACATCTCACATCTCAGTCGTGGATGACATGGGAGTTGATCTGTTGAATTTATCACCAGCAGGAAGTAAGGATAGTCAAAATGTGGATCTTGTCAGTGGAACAGAGAAGAGCCCTCATcgaaaaatgaaacgaaataAAAGTGCTGATGATGTTCTTAGTCCTGGACTGCATGAGGATGATGACTTCTTCAATCAGATGGGAAGTCGTAGCTCCAGCTCCAGCAGGGAAAATGTAACTTCATTCACTGTTGCTGGTGCAGATTCTGCCACGTTTGATCCCTTTCAGACTACAAGGACTAAATCTCCTGATCTGTCCTCAGGGGGTAATGGGAGGGAGCCAGCATCCTCAGACCTATTTGATCCATTCAGCTCTAAAAGTCCAAGTTCAAAGCCTTCTGATGAGTTTGATCTTTTTGGTGCTAAGCCAGGTCAGGGCAGCAGCAGTACAGAAACATTTCCACCCTTAAGCACAAATAATGGTGGATCAAACCTGAATTCATTTGATCCATTTGGAAAGACCTCCACAGAGCAAGACCTCTTTGGAATTGGTGGTTCTCAGGCTCCCACAACCACAGCTCAGGCTCAAACACAGAGCAATACTGATCTGTTTGGAGACTGGGGTGACTCATCATCAGAAACTCTTCAACCATCTAAAGTTCCATCACCAATTCCTCAAAGAGCACCAACCAGCCCAGCACCACAGAACAAACCTACAGCAACACCAAGTGATCCTTTCTCTGACTTTGGAAATTTGACATCAAATTTACCGAAGTTTCCCTCTGTTCCAACATTTAAAGCAGGTACAGCAACTTCACCCAAACCACAAAAGAAACCTGAGTCCTCCACTAGTGGCAATCCCTCTTGGTCTCGTCCAGCCCAGCAACCATCTTGGCATTCTGGGGCTAAACCAAGTGGTCCATCAAAGGttccacaaaaaccaaactaTGCACCCTCCTACAGTATGTCTGGTTCTTCTGGGGTATTTGGAAACTATGGACAAAAATGGAGTGcacCCAAACCAGTTGGCCAAAATGAGTTTAGTGACATTCTAAATGCACAAGGTTTTAATCGCCCAACTGCACAAGGAGCACAAGGGGCACAAACTCTAAGCTCTcttaaaaaggaacaaaacaaacctgatGACCCTATCAAGGCTAAGgttgaGGAGTGGTCTGAAGGTAAAAGAGGCAATATTCGGGCCTTATTATGCTCACTCCACCTTATACTGTGGGAAGGAGAAGACAGATGGAAACCATGTGGCATGCACAATCTTGTTCAACCTGAACAGGTGAAAAAATGGTACAGAAAAGCTGTACTATCAGTACATCCTGACAAGcTGACTGGCAGCCCAGAAGAGCCACTAGCACGTGCAATTTTTATGGAATTAAATGATGCATGGGCAATATTTGAAAAGGAGGGATCAAAACCATTATTTTAAAGGGAAATGTTAAAATACATGTTGTATTAGTCAAGTGGCAAGAGTCTTAAAATCAATAGAAAGAGACAATGGAACTAGCAAACACATTACACAGCTGAACCAGTCTCTGCTGGTGGGGTCATAGATAATTAAGAGATACAGTTAGTATCATTTGTAAATGTGCTTGCTATGATTTGTCAATTTAGTGGGTAGACATTTTACTGTACAGTCTGATAAATTCAAGAGTTGGTTTGAACTGAAATCTTCCCTCATCTGTTTGAACTcctagaaaaaaatcttgctTATCTTGTTTTCTCTGACTGTACTTAAATTTACATAACTACAGTAGGACCTCGAACTCATTTAGTAAGAAGTATGTATATTAAACGGCTAAGAATATATggaagtcatatatttgacCTGTGGATAAAGACATggatgaaagtgatcctcacAGTAATGtacactacttgagcagtagtgaaaataaggcctgaaaaaaaattcaggcctgtactGCACTGGTATCGCAGAAGTCATGGGTTCAtatcccgtacaggcctgaatttctttcaggccttattttcactaccgCTCAAGTAGTGTACATTACTGcaaggatcactttcattcaagTATGTATATTGTTGGGAAAACACACGCTTATTTGTAGATGCTACAAGTTGATGTACATGTTTATACATTATTTCTTGAGAGAACTACTGagaatcacaaattttttctcacaatcTTACTTCATATCAAAttcttcccctcccctcccctcccctcccctatCCCTGATATCCTTTGGACAAAAAGTATCAATGTTATTGTCAAAGATAATGCCAATAATGACTTTAATTTAGAACAACTACCTTGAttcatgttgtttttcctttaaggtATTAAGTTATCTTTCCCAGTGAGGGGTGTAAGGAGTATTATTTTTcacgaaaaaaaggaagcagaACAATTCTGGTATTTGTGGTCAAATAATATAGAGTTGACTGAGGggtattatttttaattattacaaaataagaaagaatcaaaacttcttagaatgcaaatttgtttCGTCCAAGAGGCTATCACATAGAAGTAGTGATGTGTGAAATAATGTCTCATGGAtattaatcttttaaaaaaaaaaagtccttgCCGTCAATAGTAACTAATgaggaattaaaaattatttgcagtAGCTTGGTGAACATGTCGTAACTCACTGTTTTTAAGAATAGCTCATCTACTCCAGACATCTTGTTTTGAGGGGATAACCTGGTTAAAATGATTGATGAGAGTTGTGTCTCATTCAAAGTCGACAGTGtggaaaaactttgtttttagatTGTCACTTGCTATGGTGCATTGgtcaatttttaatgaaggGTGGGTACAAGCCACTAAATAAGATGAAGCTTCCCAGTAATAGTGTGCGCTGGATGTATTAGCCCTCAGTTCTTGGGAATTACCTGGTAAtagttatcaaaacaaagtttatgcTAAGGGTAGTGCTAAGGTAACAGCTGGTTTTGCTACATTTTGAGTTTGCTATATATGAGTCTGCTACATCAGTAAACCTTGTAAACCTAGTAAACCAGTGTTAATCAAATGTTAGTTGTCAAACTAGTTGGTATAATTGAAAAATCTGGGAAATGGTCTGGCATTTATTACACAAAGGGCTTTCCCTTGATAACGTTTTTAATGCATCTGTTGCCTTCACTGAAGGTACACTTTTTAAGAAGTGATCAAGAGACACTGTTCTTGACAAGCCTCAATATAGGTTACTGCTGACAAAGATTTATCACAACAAACTCAACTCAATATATAGTCAGTTATGATTATtactttgtattttattttcattctttcctaCGAAGCTTTCTACAAGATTAGACAAGTTACTTTGATTTATGAAACTATTACAAAACTGAATCTTTTGCAATTATAACACAAATTGCTTACCTACATACCAACAGTTCAAGTtaagttttcttgaattttaccTCCATTTTGTGAATAACCTCAGTGATTTCCTCAGATCTTTCCATTTCCACATGGTTCACCTATCTAGAACTAGTCTAAGGATTTCACTTCAAAAAGTGTTCTATTGCTTAAGCAGAAACCCTTGCATAATTCTTCAGTTCCAACATAATGTTGGtggaaaactgaatttgtCTCCAATCATTGTGGCTTAAAAGAACCTGTTTCTAACTGACAAGTTCAACAATCTTGGTATGCAATCTTTAGAAGCCTCCTCCTAGCTGAGtaaataacataatttatttcttttaataatcCTTTCACCTCCAAGGTTTCTATATGCCACACTGTTTGCACTGTTTTCAGTTGTTGAATCAatcattataaaataattcaaatagtacgcatgctctgattggccataaaaccattttacatgaacaTATGTAAACACAGTTTTTCATAgctctttcattagttattttataaaataaatgtaaaatggtttccgtgtttacatagcctgatgtaaacacgcgggaggttgggagaacacta

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF10409 all species →	PTEN_C2	C2 domain of PTEN tumour-suppressor protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR014020 all species →	Domain	Tensin phosphatase, C2 domain	Interproscan
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22967 all species →	SERINE/THREONINE PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0035612 all species →	Molecular Function	AP-2 adaptor complex binding	Interproscan
GO:0045747 all species →	Biological Process	positive regulation of Notch signaling pathway	Interproscan
GO:2000369 all species →	Biological Process	regulation of clathrin-dependent endocytosis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08855	GAK; cyclin G-associated kinase	EC:2.7.11.1	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.