Gene detail

Detailed information of RMX47982.1 in Pocillopora damicornis

Genomic Location: SczhEnG_2324:354680...359458
NR annotation: no NCBI-NR hit recorded
Species abbreviation PDAMI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00364 all species →	Biotin_lipoyl	Biotin-requiring enzyme	Domain	Interproscan
PF00198 all species →	2-oxoacid_dh	2-oxoacid dehydrogenases acyltransferase (catalytic domain)	Domain	Interproscan
PF02817 all species →	E3_binding	e3 binding domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000089 all species →	Domain	Biotin/lipoyl attachment	Interproscan
IPR003016 all species →	Binding_site	2-oxo acid dehydrogenase, lipoyl-binding site	Interproscan
IPR004167 all species →	Domain	Peripheral subunit-binding domain	Interproscan
IPR023213 all species →	Homologous_superfamily	Chloramphenicol acetyltransferase-like domain superfamily	Interproscan
IPR001078 all species →	Domain	2-oxoacid dehydrogenase acyltransferase, catalytic domain	Interproscan
IPR036625 all species →	Homologous_superfamily	E3-binding domain superfamily	Interproscan
IPR011053 all species →	Homologous_superfamily	Single hybrid motif	Interproscan
IPR050743 all species →	Family	2-oxoacid dehydrogenase family, E2 component	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43178 all species →	DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0016407 all species →	Molecular Function	acetyltransferase activity	Interproscan
GO:0031405 all species →	Molecular Function	lipoic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09699	DBT, bkdB; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)	EC:2.3.1.168	Lipoic acid metabolism	ko00785	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.